Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes POMGNT2
  • Mouse genes Pomgnt2
  • Rat genes Pomgnt2
  • Zfish genes pomgnt2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pomgnt2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0008375	acetylglucosaminyltransferase activity	POMGNT2	IDA		Human	PMID:23929950
Molecular Function	GO:0005515	protein binding	POMGNT2	IPI	UniProtKB:Q7Z3S9	Human	PMID:25416956
Molecular Function	GO:0097363	protein O-acetylglucosaminyltransferase activity	POMGNT2	IDA		Human	PMID:23929950
Molecular Function	GO:0097363	protein O-acetylglucosaminyltransferase activity	POMGNT2	IMP		Human	PMID:27066570
Cellular Component	GO:0005783	endoplasmic reticulum	POMGNT2	IDA		Human	PMID:23929950
Cellular Component	GO:0005783	endoplasmic reticulum	POMGNT2	IDA		Human	PMID:27066570
Biological Process	GO:0007420	brain development	pomgnt2	IMP	ZFIN:ZDB-MRPHLNO-121005-1	Zfish	PMID:22958903
Biological Process	GO:0055001	muscle cell development	pomgnt2	IMP	ZFIN:ZDB-MRPHLNO-121005-1	Zfish	PMID:22958903
Biological Process	GO:0001764	neuron migration	Pomgnt2	IMP		Mouse	MGI:MGI:5607394|PMID:24256719
Biological Process	GO:0006493	protein O-linked glycosylation	POMGNT2	IDA		Human	PMID:23929950
Biological Process	GO:0006493	protein O-linked glycosylation	POMGNT2	IMP		Human	PMID:27066570
Biological Process	GO:0035269	protein O-linked mannosylation	Pomgnt2	IMP		Mouse	MGI:MGI:5607394|PMID:24256719
Biological Process	GO:0060041	retina development in camera-type eye	pomgnt2	IMP	ZFIN:ZDB-MRPHLNO-121005-1	Zfish	PMID:22958903

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern