Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PMF1,PMF1-BGLAP
  • Mouse genes Pmf1
  • Rat genes Pmf1
  • Zfish genes si:dkey-6i22.5
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pmf1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0043522	leucine zipper domain binding	PMF1	IPI	UniProtKB:Q16236	Human	PMID:11256947
Molecular Function	GO:0005515	protein binding	PMF1	IPI	UniProtKB:Q9H081	Human	PMID:15371340
Molecular Function	GO:0005515	protein binding	PMF1	IPI	UniProtKB:Q9H081	Human	PMID:15502821
Molecular Function	GO:0005515	protein binding	PMF1	IPI	UniProtKB:Q9H410	Human	PMID:15502821
Molecular Function	GO:0005515	protein binding	PMF1	IPI	UniProtKB:Q9H081	Human	PMID:20360068
Molecular Function	GO:0005515	protein binding	PMF1	IPI	UniProtKB:Q9H081	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	PMF1	IPI	UniProtKB:Q8N6Y0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PMF1	IPI	UniProtKB:Q9H081	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PMF1	IPI	UniProtKB:Q9H081	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	PMF1	IPI	UniProtKB:Q8TD16-2	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	PMF1	IPI	UniProtKB:Q99598	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	PMF1	IPI	UniProtKB:Q9H081	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	PMF1	IPI	UniProtKB:Q9NVF7	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	PMF1	IPI	UniProtKB:Q14696	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PMF1	IPI	UniProtKB:Q5JVL4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PMF1	IPI	UniProtKB:Q8IYX1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PMF1	IPI	UniProtKB:Q8TD16-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PMF1	IPI	UniProtKB:Q92529	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PMF1	IPI	UniProtKB:Q99598	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PMF1	IPI	UniProtKB:Q9H081	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PMF1	IPI	UniProtKB:Q9NVF7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PMF1	IPI	UniProtKB:O14901	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PMF1	IPI	UniProtKB:P46379-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PMF1	IPI	UniProtKB:Q7Z699	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PMF1	IPI	UniProtKB:Q9BVL2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PMF1	IPI	UniProtKB:Q9NX09	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PMF1	IPI	UniProtKB:Q16236	Human	PMID:32911434
Molecular Function	GO:0005515	protein binding	Pmf1	IPI	UniProtKB:Q60795	Mouse	MGI:MGI:3688011|PMID:11583586
Molecular Function	GO:0003713	transcription coactivator activity	PMF1	IMP		Human	PMID:11256947
Cellular Component	GO:0005794	Golgi apparatus	PMF1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	PMF1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0000776	kinetochore	PMF1	IDA		Human	PMID:15371340
Cellular Component	GO:0000444	MIS12/MIND type complex	PMF1	IDA		Human	PMID:16585270
Cellular Component	GO:0005654	nucleoplasm	PMF1	IDA		Human	GO_REF:0000052
Biological Process	GO:0007059	chromosome segregation	PMF1	IMP		Human	PMID:15502821

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern