Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PLXDC1
  • Mouse genes Plxdc1
  • Rat genes Plxdc1
  • Zfish genes plxdc1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Plxdc1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	PLXDC1	IPI	UniProtKB:Q14247	Human	PMID:15574754
Molecular Function	GO:0005515	protein binding	Plxdc1	IPI	UniProtKB:P08460	Mouse	MGI:MGI:5306307|PMID:16574105
Molecular Function	GO:0005515	protein binding	Plxdc1	IPI	UniProtKB:B5DFC9	Mouse	MGI:MGI:5306307|PMID:16574105
Cellular Component	GO:0005737	cytoplasm	Plxdc1	IDA		Mouse	MGI:MGI:5306307|PMID:16574105
Cellular Component	GO:0030425	dendrite	Plxdc1	IDA		Rat	PMID:15893603|RGD:2325873
Cellular Component	GO:0043025	neuronal cell body	Plxdc1	IDA		Rat	PMID:15893603|RGD:2325873
Cellular Component	GO:0005886	plasma membrane	Plxdc1	IDA		Mouse	MGI:MGI:5306307|PMID:16574105
Cellular Component	GO:0043235	receptor complex	PLXDC1	IDA		Human	PMID:23382219
Biological Process	GO:0021510	spinal cord development	Plxdc1	IEP		Rat	PMID:20411127|RGD:2325872

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern