Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PKDCC
  • Mouse genes Pkdcc
  • Rat genes Pkdcc
  • Zfish genes pkdcca,pkdccb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pkdcc

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0004715	non-membrane spanning protein tyrosine kinase activity	PKDCC	IDA		Human	PMID:25171405
Molecular Function	GO:0004715	non-membrane spanning protein tyrosine kinase activity	Pkdcc	IDA		Mouse	MGI:MGI:5604027|PMID:25171405
Molecular Function	GO:0004672	protein kinase activity	Pkdcc	IDA		Mouse	MGI:MGI:4438146|PMID:19465597
Cellular Component	GO:0005576	extracellular region	PKDCC	IDA		Human	PMID:25171405
Cellular Component	GO:0005576	extracellular region	Pkdcc	IDA		Mouse	MGI:MGI:5604027|PMID:25171405
Cellular Component	GO:0005794	Golgi apparatus	Pkdcc	IDA		Mouse	MGI:MGI:4438146|PMID:19465597
Biological Process	GO:0030282	bone mineralization	Pkdcc	IMP	MGI:MGI:5014347	Mouse	PMID:21553379
Biological Process	GO:0048701	embryonic cranial skeleton morphogenesis	pkdccb	IMP	ZFIN:ZDB-MRPHLNO-130808-3	Zfish	PMID:23559552
Biological Process	GO:0048701	embryonic cranial skeleton morphogenesis	pkdccb	IMP	ZFIN:ZDB-MRPHLNO-130808-4	Zfish	PMID:23559552
Biological Process	GO:0048566	embryonic digestive tract development	Pkdcc	IMP		Mouse	MGI:MGI:3813934|PMID:19097194
Biological Process	GO:0035108	limb morphogenesis	Pkdcc	IMP	GO:0035108	Mouse	PMID:21553379
Biological Process	GO:0048286	lung alveolus development	Pkdcc	IMP		Mouse	MGI:MGI:4438146|PMID:19465597
Biological Process	GO:0035264	multicellular organism growth	Pkdcc	IMP	MGI:MGI:5014347	Mouse	PMID:21553379
Biological Process	GO:0042997	negative regulation of Golgi to plasma membrane protein transport	Pkdcc	IDA		Mouse	MGI:MGI:4438146|PMID:19465597
Biological Process	GO:0018108	peptidyl-tyrosine phosphorylation	PKDCC	IDA		Human	PMID:25171405
Biological Process	GO:0018108	peptidyl-tyrosine phosphorylation	Pkdcc	IDA		Mouse	MGI:MGI:5604027|PMID:25171405
Biological Process	GO:0030501	positive regulation of bone mineralization	Pkdcc	IMP		Mouse	MGI:MGI:3813934|PMID:19097194
Biological Process	GO:0032332	positive regulation of chondrocyte differentiation	Pkdcc	IMP		Mouse	MGI:MGI:4438146|PMID:19465597
Biological Process	GO:0032332	positive regulation of chondrocyte differentiation	Pkdcc	IMP		Mouse	MGI:MGI:3813934|PMID:19097194
Biological Process	GO:0060021	roof of mouth development	Pkdcc	IMP		Mouse	MGI:MGI:3813934|PMID:19097194
Biological Process	GO:0060021	roof of mouth development	Pkdcc	IMP		Mouse	MGI:MGI:4438146|PMID:19465597
Biological Process	GO:0001501	skeletal system development	PKDCC	IMP		Human	PMID:30478137
Biological Process	GO:0001501	skeletal system development	Pkdcc	IMP	MGI:MGI:5014347	Mouse	PMID:21553379

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern