Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PHF21A
  • Mouse genes Phf21a
  • Rat genes Phf21a
  • Zfish genes phf21aa,phf21ab
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Phf21a

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003682	chromatin binding	Phf21a	IDA		Mouse	PMID:16684532
Molecular Function	GO:0003682	chromatin binding	Phf21a	IDA		Rat	PMID:19439607|RGD:9588528
Molecular Function	GO:0005515	protein binding	PHF21A	IPI	UniProtKB:P37198	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PHF21A	IPI	UniProtKB:Q13077	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PHF21A	IPI	UniProtKB:Q13643	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PHF21A	IPI	UniProtKB:Q15942	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PHF21A	IPI	UniProtKB:Q6A162	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PHF21A	IPI	UniProtKB:Q8N9N5	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PHF21A	IPI	UniProtKB:Q15942	Human	PMID:29892012
Molecular Function	GO:0005515	protein binding	PHF21A	IPI	UniProtKB:P37198	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	PHF21A	IPI	UniProtKB:Q13077	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	PHF21A	IPI	UniProtKB:Q13643	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	PHF21A	IPI	UniProtKB:Q15942	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	PHF21A	IPI	UniProtKB:Q8N9N5	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	PHF21A	IPI	UniProtKB:Q8N9N5-2	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	PHF21A	IPI	UniProtKB:P37198	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF21A	IPI	UniProtKB:Q02447	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF21A	IPI	UniProtKB:Q13643	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF21A	IPI	UniProtKB:Q14192	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF21A	IPI	UniProtKB:Q8N9N5-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF21A	IPI	UniProtKB:Q96B26	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PHF21A	IPI	UniProtKB:Q96JM7-2	Human	PMID:32296183
Cellular Component	GO:1990391	DNA repair complex	PHF21A	IDA		Human	PMID:24217620
Cellular Component	GO:0000118	histone deacetylase complex	PHF21A	IDA		Human	PMID:15325272
Cellular Component	GO:0005634	nucleus	Phf21a	IDA		Rat	PMID:19439607|RGD:9588528
Biological Process	GO:0060324	face development	phf21ab	IMP	ZFIN:ZDB-MRPHLNO-120725-1	Zfish	PMID:22770980
Biological Process	GO:0001967	suckling behavior	Phf21a	IMP	MGI:MGI:3629054	Mouse	PMID:16684532

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern