Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PHAX
  • Mouse genes Phax
  • Rat genes Phax
  • Zfish genes phax
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Phax

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0140262	mRNA cap binding complex binding	PHAX	IDA		Human	PMID:28297668
Molecular Function	GO:0005515	protein binding	PHAX	IPI	UniProtKB:P52298	Human	PMID:26382858
Molecular Function	GO:0015643	toxic substance binding	Phax	IPI	PubChem_Compound:104826	Rat	PMID:8015392|RGD:1299449
Cellular Component	GO:0005737	cytoplasm	Phax	IDA		Mouse	PMID:10786834
Cellular Component	GO:0043025	neuronal cell body	Phax	IDA		Rat	PMID:8015392|RGD:1299449
Cellular Component	GO:0005654	nucleoplasm	PHAX	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	Phax	IDA		Mouse	PMID:10786834
Cellular Component	GO:1990904	ribonucleoprotein complex	PHAX	IDA		Human	PMID:28297668
Biological Process	GO:0043489	RNA stabilization	PHAX	IMP		Human	PMID:28297668
Biological Process	GO:0006408	snRNA export from nucleus	Phax	IDA		Mouse	PMID:10786834

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern