Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PGAM1,PGAM4
  • Mouse genes Pgam1
  • Rat genes Pgam1
  • Zfish genes pgam1a,pgam1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pgam1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0046538	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity	PGAM1	IDA		Human	PMID:23653202
Molecular Function	GO:0004082	bisphosphoglycerate mutase activity	PGAM1	IDA		Human	PMID:23653202
Molecular Function	GO:0004619	phosphoglycerate mutase activity	PGAM1	IMP		Human	PMID:12189148
Molecular Function	GO:0004619	phosphoglycerate mutase activity	PGAM1	IDA		Human	PMID:22590500
Molecular Function	GO:0004619	phosphoglycerate mutase activity	PGAM1	EXP		Human	PMID:4827367
Molecular Function	GO:0004619	phosphoglycerate mutase activity	PGAM4	IMP		Human	PMID:22590500
Molecular Function	GO:0004619	phosphoglycerate mutase activity	Pgam1	IDA		Mouse	PMID:11250083
Molecular Function	GO:0004619	phosphoglycerate mutase activity	Pgam1	IDA		Mouse	PMID:2824255
Molecular Function	GO:0004619	phosphoglycerate mutase activity	Pgam1	IDA		Mouse	MGI:MGI:52934
Molecular Function	GO:0004619	phosphoglycerate mutase activity	Pgam1	IDA		Rat	PMID:1314249|RGD:2302785
Molecular Function	GO:0005515	protein binding	PGAM1	IPI	UniProtKB:P05067	Human	PMID:16049941
Molecular Function	GO:0005515	protein binding	PGAM1	IPI	UniProtKB:P12004	Human	PMID:20849852
Molecular Function	GO:0005515	protein binding	PGAM1	IPI	UniProtKB:Q8IV45	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PGAM1	IPI	UniProtKB:P05067	Human	PMID:32814053
Molecular Function	GO:0019901	protein kinase binding	PGAM1	IPI	UniProtKB:Q13153	Human	PMID:12189148
Cellular Component	GO:0005737	cytoplasm	PGAM1	IDA		Human	PMID:22590500
Cellular Component	GO:0005829	cytosol	PGAM1	IDA		Human	PMID:12189148
Cellular Component	GO:0070062	extracellular exosome	PGAM1	HDA		Human	PMID:20458337
Cellular Component	GO:0070062	extracellular exosome	PGAM1	HDA		Human	PMID:23533145
Cellular Component	GO:0070062	extracellular exosome	PGAM4	HDA		Human	PMID:23533145
Cellular Component	GO:0016020	membrane	PGAM1	HDA		Human	PMID:19946888
Cellular Component	GO:0043209	myelin sheath	Pgam1	HDA		Mouse	MGI:MGI:3834050|PMID:17634366
Cellular Component	GO:0005634	nucleus	Pgam1	IDA		Rat	PMID:1314249|RGD:2302785
Cellular Component	GO:0005634	nucleus	Pgam1	IDA		Rat	PMID:15942958|RGD:1598733
Cellular Component	GO:0097228	sperm principal piece	PGAM4	IDA		Human	PMID:22590500
Biological Process	GO:0006094	gluconeogenesis	Pgam1	IDA		Mouse	PMID:24958256
Biological Process	GO:0006096	glycolytic process	PGAM1	IDA		Human	PMID:22590500
Biological Process	GO:0006096	glycolytic process	PGAM4	IMP		Human	PMID:22590500
Biological Process	GO:0006110	regulation of glycolytic process	PGAM1	IDA		Human	PMID:12189148
Biological Process	GO:0043456	regulation of pentose-phosphate shunt	PGAM1	IDA		Human	PMID:12189148
Biological Process	GO:0045730	respiratory burst	PGAM1	IDA		Human	PMID:12189148

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern