Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PDZD2
  • Mouse genes Pdzd2
  • Rat genes Pdzd2
  • Zfish genes pdzd2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pdzd2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	Pdzd2	IPI	UniProtKB:O35116	Rat	PMID:10896674|RGD:633698
Molecular Function	GO:0005515	protein binding	Pdzd2	IPI	UniProtKB:Q62968	Rat	PMID:12591166|RGD:8553968
Cellular Component	GO:0045177	apical part of cell	Pdzd2	IDA		Rat	PMID:10896674|RGD:633698
Cellular Component	GO:0005911	cell-cell junction	Pdzd2	IDA		Rat	PMID:10896674|RGD:633698
Cellular Component	GO:0034451	centriolar satellite	PDZD2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005737	cytoplasm	PDZD2	IDA		Human	PMID:11289102
Cellular Component	GO:0005829	cytosol	PDZD2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005783	endoplasmic reticulum	Pdzd2	IDA		Rat	PMID:12671685|RGD:8553297
Cellular Component	GO:0005576	extracellular region	Pdzd2	IDA		Rat	PMID:12671685|RGD:8553297
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	PDZD2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0043005	neuron projection	Pdzd2	IDA		Rat	PMID:10896674|RGD:633698
Cellular Component	GO:0005634	nucleus	Pdzd2	IDA		Rat	PMID:12671685|RGD:8553297
Cellular Component	GO:0005886	plasma membrane	PDZD2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0014069	postsynaptic density	Pdzd2	IDA		Rat	PMID:10896674|RGD:633698

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern