Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PDLIM3
  • Mouse genes Pdlim3
  • Rat genes Pdlim3
  • Zfish genes pdlim3a,pdlim3b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pdlim3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042805	actinin binding	Pdlim3	IDA		Rat	PMID:9334352|RGD:634540
Molecular Function	GO:0008092	cytoskeletal protein binding	Pdlim3	IPI	PR:Q7TPR4	Mouse	PMID:11329061
Molecular Function	GO:0005515	protein binding	PDLIM3	IPI	UniProtKB:P35609	Human	PMID:23414517
Molecular Function	GO:0005515	protein binding	PDLIM3	IPI	UniProtKB:P49792	Human	PMID:23414517
Molecular Function	GO:0005515	protein binding	PDLIM3	IPI	UniProtKB:P35609	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PDLIM3	IPI	UniProtKB:P35609	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	Pdlim3	IPI	UniProtKB:P70271	Mouse	MGI:MGI:6103273|PMID:15663004
Molecular Function	GO:0008307	structural constituent of muscle	Pdlim3	IDA		Mouse	PMID:11238905
Cellular Component	GO:0015629	actin cytoskeleton	Pdlim3	IPI	PR:Q7TPR4	Mouse	PMID:11329061
Cellular Component	GO:0005829	cytosol	PDLIM3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0030018	Z disc	Pdlim3	IDA		Rat	PMID:9334352|RGD:634540
Biological Process	GO:0007015	actin filament organization	Pdlim3	IDA		Mouse	PMID:11329061
Biological Process	GO:0007507	heart development	Pdlim3	IMP	MGI:MGI:2388199	Mouse	PMID:11329061

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern