Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PCIF1
  • Mouse genes Pcif1
  • Rat genes Pcif1
  • Zfish genes pcif1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pcif1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0016422	mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity	PCIF1	IDA		Human	PMID:30467178
Molecular Function	GO:0016422	mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity	PCIF1	IDA		Human	PMID:30487554
Molecular Function	GO:0016422	mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity	PCIF1	IDA		Human	PMID:31279658
Molecular Function	GO:0016422	mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity	PCIF1	IDA		Human	PMID:31279659
Molecular Function	GO:0016422	mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity	PCIF1	IDA		Human	PMID:32814042
Molecular Function	GO:0016422	mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity	PCIF1	IDA		Human	PMID:33428944
Molecular Function	GO:0016422	mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity	pcif1	IDA		Zfish	PMID:30467178|ZFIN:ZDB-PUB-200522-32
Molecular Function	GO:0099122	RNA polymerase II C-terminal domain binding	PCIF1	IDA		Human	PMID:18294453
Molecular Function	GO:0099122	RNA polymerase II C-terminal domain binding	PCIF1	IDA		Human	PMID:30467178
Molecular Function	GO:1990269	RNA polymerase II C-terminal domain phosphoserine binding	PCIF1	IDA		Human	PMID:32814042
Molecular Function	GO:1904047	S-adenosyl-L-methionine binding	PCIF1	IDA		Human	PMID:30467178
Molecular Function	GO:1904047	S-adenosyl-L-methionine binding	pcif1	IDA		Zfish	PMID:30467178|ZFIN:ZDB-PUB-200522-32
Cellular Component	GO:0045171	intercellular bridge	PCIF1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0015630	microtubule cytoskeleton	PCIF1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	PCIF1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	PCIF1	IDA		Human	PMID:18294453
Cellular Component	GO:0005634	nucleus	PCIF1	IDA		Human	PMID:31279659
Biological Process	GO:0080009	mRNA methylation	PCIF1	IDA		Human	PMID:30467178
Biological Process	GO:0080009	mRNA methylation	PCIF1	IDA		Human	PMID:30487554
Biological Process	GO:0080009	mRNA methylation	PCIF1	IDA		Human	PMID:31279658
Biological Process	GO:0080009	mRNA methylation	PCIF1	IDA		Human	PMID:31279659
Biological Process	GO:0080009	mRNA methylation	PCIF1	IDA		Human	PMID:32814042
Biological Process	GO:0080009	mRNA methylation	PCIF1	IDA		Human	PMID:33428944
Biological Process	GO:0080009	mRNA methylation	Pcif1	IMP		Mouse	MGI:MGI:6368443|PMID:30487554
Biological Process	GO:0080009	mRNA methylation	pcif1	IDA		Zfish	PMID:30467178|ZFIN:ZDB-PUB-200522-32
Biological Process	GO:0017148	negative regulation of translation	PCIF1	IDA		Human	PMID:31279659
Biological Process	GO:0045727	positive regulation of translation	PCIF1	IMP		Human	PMID:30467178

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern