Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PCDH17
  • Mouse genes Pcdh17
  • Rat genes Pcdh17
  • Zfish genes pcdh17
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pcdh17

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	PCDH17	IPI	UniProtKB:P21754	Human	PMID:19945174
Molecular Function	GO:0005515	protein binding	PCDH17	IPI	UniProtKB:Q8IY57-5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PCDH17	IPI	UniProtKB:Q9Y3Q8	Human	PMID:32296183
Cellular Component	GO:0098982	GABA-ergic synapse	Pcdh17	IEP		Mouse	PMID:23684785
Cellular Component	GO:0098982	GABA-ergic synapse	Pcdh17	IDA		Mouse	PMID:23684785
Cellular Component	GO:0098982	GABA-ergic synapse	Pcdh17	IPI		Mouse	PMID:23684785
Cellular Component	GO:0098982	GABA-ergic synapse	Pcdh17	IMP		Mouse	PMID:23684785
Cellular Component	GO:0098978	glutamatergic synapse	Pcdh17	IDA		Mouse	PMID:23684785
Cellular Component	GO:0098978	glutamatergic synapse	Pcdh17	IEP		Mouse	PMID:23684785
Cellular Component	GO:0098978	glutamatergic synapse	Pcdh17	IMP		Mouse	PMID:23684785
Cellular Component	GO:0098978	glutamatergic synapse	Pcdh17	IPI		Mouse	PMID:23684785
Cellular Component	GO:0045211	postsynaptic membrane	Pcdh17	IDA		Mouse	PMID:23684785
Cellular Component	GO:0045211	postsynaptic membrane	Pcdh17	IEP		Mouse	PMID:23684785
Cellular Component	GO:0042734	presynaptic membrane	Pcdh17	IDA		Mouse	PMID:23684785
Cellular Component	GO:0042734	presynaptic membrane	Pcdh17	IEP		Mouse	PMID:23684785
Biological Process	GO:0030534	adult behavior	Pcdh17	IMP		Mouse	PMID:23684785
Biological Process	GO:0048675	axon extension	pcdh17	IMP	ZFIN:ZDB-GENO-190508-22	Zfish	PMID:30089266
Biological Process	GO:0007411	axon guidance	pcdh17	IMP	ZFIN:ZDB-GENO-190508-22	Zfish	PMID:30089266
Biological Process	GO:0060219	camera-type eye photoreceptor cell differentiation	pcdh17	IMP	ZFIN:ZDB-MRPHLNO-130516-2	Zfish	PMID:22927092
Biological Process	GO:0060219	camera-type eye photoreceptor cell differentiation	pcdh17	IMP	ZFIN:ZDB-MRPHLNO-130516-1	Zfish	PMID:22927092
Biological Process	GO:0050805	negative regulation of synaptic transmission	Pcdh17	IMP		Mouse	PMID:23684785
Biological Process	GO:1904071	presynaptic active zone assembly	Pcdh17	IMP		Mouse	PMID:23684785
Biological Process	GO:2000807	regulation of synaptic vesicle clustering	Pcdh17	IMP		Mouse	PMID:23684785
Biological Process	GO:0060041	retina development in camera-type eye	pcdh17	IMP	ZFIN:ZDB-MRPHLNO-130516-1	Zfish	PMID:22927092
Biological Process	GO:0060041	retina development in camera-type eye	pcdh17	IMP	ZFIN:ZDB-MRPHLNO-130516-2	Zfish	PMID:22927092
Biological Process	GO:0099560	synaptic membrane adhesion	Pcdh17	IPI		Mouse	PMID:23684785
Biological Process	GO:0099560	synaptic membrane adhesion	Pcdh17	IMP		Mouse	PMID:23684785
Biological Process	GO:0099560	synaptic membrane adhesion	Pcdh17	IDA		Mouse	PMID:23684785

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern