Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PCBP3
  • Mouse genes Pcbp3
  • Rat genes Pcbp3
  • Zfish genes pcbp3
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pcbp3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:1990829	C-rich single-stranded DNA binding	Pcbp3	IDA		Mouse	PMID:22521865
Molecular Function	GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	Pcbp3	IDA		Mouse	PMID:22521865
Molecular Function	GO:0003690	double-stranded DNA binding	Pcbp3	IDA		Mouse	PMID:22521865
Molecular Function	GO:0003723	RNA binding	PCBP3	HDA		Human	PMID:22658674
Cellular Component	GO:0005829	cytosol	PCBP3	HDA		Human	PMID:16780588
Cellular Component	GO:0070062	extracellular exosome	PCBP3	HDA		Human	PMID:23533145
Cellular Component	GO:0005634	nucleus	PCBP3	HDA		Human	PMID:16780588
Biological Process	GO:0006351	DNA-templated transcription	Pcbp3	IDA		Mouse	MGI:MGI:5428778|PMID:22521865
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	Pcbp3	IDA		Mouse	PMID:22521865

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern