Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PAN2
  • Mouse genes Pan2
  • Rat genes Pan2
  • Zfish genes pan2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pan2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0000175	3'-5'-RNA exonuclease activity	PAN2	IDA		Human	PMID:14583602
Molecular Function	GO:0004535	poly(A)-specific ribonuclease activity	PAN2	IDA		Human	PMID:14583602
Molecular Function	GO:0005515	protein binding	PAN2	IPI	UniProtKB:Q58A45	Human	PMID:14583602
Molecular Function	GO:0005515	protein binding	PAN2	IPI	UniProtKB:Q58A45	Human	PMID:19615732
Molecular Function	GO:0005515	protein binding	PAN2	IPI	UniProtKB:Q9HCJ0	Human	PMID:21981923
Molecular Function	GO:0005515	protein binding	PAN2	IPI	UniProtKB:Q9HCJ0	Human	PMID:21984185
Molecular Function	GO:0005515	protein binding	Pan2	IPI	PR:Q640Q5	Mouse	PMID:18625844
Cellular Component	GO:0000932	P-body	Pan2	IDA		Mouse	PMID:18625844
Cellular Component	GO:0031251	PAN complex	PAN2	IDA		Human	PMID:14583602

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern