Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PACS1
  • Mouse genes Pacs1
  • Rat genes Pacs1
  • Zfish genes pacs1a
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pacs1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	PACS1	IPI	UniProtKB:P03406	Human	PMID:10707087
Molecular Function	GO:0005515	protein binding	PACS1	IPI	UniProtKB:P11717	Human	PMID:16977309
Molecular Function	GO:0005515	protein binding	PACS1	IPI	UniProtKB:P67870	Human	PMID:16977309
Molecular Function	GO:0005515	protein binding	PACS1	IPI	UniProtKB:Q9NZ52	Human	PMID:16977309
Molecular Function	GO:0005515	protein binding	PACS1	IPI	UniProtKB:Q92673	Human	PMID:17855360
Molecular Function	GO:0005515	protein binding	PACS1	IPI	UniProtKB:Q92673	Human	PMID:24001769
Molecular Function	GO:0005515	protein binding	PACS1	IPI	UniProtKB:D3DTS7	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PACS1	IPI	UniProtKB:P37840	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PACS1	IPI	UniProtKB:P42858	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PACS1	IPI	UniProtKB:P54253	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PACS1	IPI	UniProtKB:Q13148	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PACS1	IPI	UniProtKB:Q92870-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PACS1	IPI	UniProtKB:Q9Y2I8	Human	PMID:34642815
Molecular Function	GO:0005515	protein binding	Pacs1	IPI	UniProtKB:Q8CBE3	Mouse	MGI:MGI:6729769|PMID:33630350
Molecular Function	GO:0044325	transmembrane transporter binding	PACS1	IPI	UniProtKB:Q13563	Human	PMID:15692563
Cellular Component	GO:0030137	COPI-coated vesicle	Pacs1	IDA		Mouse	PMID:9695949
Cellular Component	GO:0048471	perinuclear region of cytoplasm	Pacs1	IDA		Rat	PMID:9695949|RGD:633354
Biological Process	GO:0002260	lymphocyte homeostasis	Pacs1	IMP		Mouse	MGI:MGI:6729769|PMID:33630350
Biological Process	GO:0032092	positive regulation of protein binding	Pacs1	IMP		Rat	PMID:9695949|RGD:633354
Biological Process	GO:0008104	protein localization	Pacs1	IMP		Rat	PMID:10075651|RGD:1303369
Biological Process	GO:0034067	protein localization to Golgi apparatus	Pacs1	IDA		Mouse	PMID:9695949
Biological Process	GO:0072659	protein localization to plasma membrane	PACS1	IMP		Human	PMID:15692563

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern