Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PA2G4
  • Mouse genes Pa2g4
  • Rat genes Pa2g4
  • Zfish genes pa2g4a,pa2g4b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pa2g4

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003676	nucleic acid binding	PA2G4	IDA		Human	PMID:15073182
Molecular Function	GO:0005515	protein binding	PA2G4	IPI	UniProtKB:P06400	Human	PMID:11268000
Molecular Function	GO:0005515	protein binding	PA2G4	IPI	UniProtKB:P19338	Human	PMID:15064750
Molecular Function	GO:0005515	protein binding	PA2G4	IPI	UniProtKB:Q96ST3	Human	PMID:16254079
Molecular Function	GO:0005515	protein binding	PA2G4	IPI	UniProtKB:P21860	Human	PMID:16832058
Molecular Function	GO:0005515	protein binding	Pa2g4	IPI	UniProtKB:P47196	Rat	PMID:16832058|RGD:10047374
Molecular Function	GO:0003723	RNA binding	PA2G4	HDA		Human	PMID:22658674
Molecular Function	GO:0003714	transcription corepressor activity	PA2G4	IDA		Human	PMID:15073182
Molecular Function	GO:0031625	ubiquitin protein ligase binding	PA2G4	IPI	UniProtKB:Q5VTR2	Human	PMID:19037095
Cellular Component	GO:0005737	cytoplasm	PA2G4	IDA		Human	PMID:16832058
Cellular Component	GO:0005737	cytoplasm	PA2G4	IDA		Human	PMID:19037095
Cellular Component	GO:0005737	cytoplasm	Pa2g4	IDA		Rat	PMID:16832058|RGD:10047374
Cellular Component	GO:0070062	extracellular exosome	PA2G4	HDA		Human	PMID:20458337
Cellular Component	GO:0016020	membrane	PA2G4	HDA		Human	PMID:19946888
Cellular Component	GO:0005730	nucleolus	PA2G4	IDA		Human	PMID:16832058
Cellular Component	GO:0005730	nucleolus	PA2G4	IDA		Human	PMID:19037095
Cellular Component	GO:0005730	nucleolus	Pa2g4	IDA		Rat	PMID:16832058|RGD:10047374
Cellular Component	GO:0005634	nucleus	PA2G4	IDA		Human	PMID:15073182
Biological Process	GO:0043066	negative regulation of apoptotic process	Pa2g4	IDA		Rat	PMID:16832058|RGD:10047374
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	PA2G4	IDA		Human	PMID:15073182
Biological Process	GO:0045597	positive regulation of cell differentiation	Pa2g4	IDA		Rat	PMID:16832058|RGD:10047374

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern