Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes P4HA2
  • Mouse genes P4ha2
  • Rat genes P4ha2
  • Zfish genes p4ha2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set P4ha2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0004656	procollagen-proline 4-dioxygenase activity	P4HA2	IDA		Human	PMID:9211872
Molecular Function	GO:0004656	procollagen-proline 4-dioxygenase activity	P4ha2	IDA		Mouse	PMID:7753822
Molecular Function	GO:0005515	protein binding	P4ha2	IPI	UniProtKB:P07237	Mouse	PMID:7753822
Cellular Component	GO:0005829	cytosol	P4HA2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005783	endoplasmic reticulum	P4HA2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	P4HA2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	P4HA2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016222	procollagen-proline 4-dioxygenase complex	P4ha2	IDA		Mouse	PMID:7753822
Biological Process	GO:0018401	peptidyl-proline hydroxylation to 4-hydroxy-L-proline	P4ha2	IDA		Mouse	PMID:7753822

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern