Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes OTUD6A
  • Mouse genes Otud6a
  • Rat genes Otud6a
  • Zfish genes otud6b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Otud6a

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0004843	cysteine-type deubiquitinase activity	OTUD6A	IDA		Human	PMID:23827681
Molecular Function	GO:0005515	protein binding	OTUD6A	IPI	UniProtKB:P12524-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	OTUD6A	IPI	UniProtKB:P37198	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	OTUD6A	IPI	UniProtKB:P63167	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	OTUD6A	IPI	UniProtKB:Q04743	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	OTUD6A	IPI	UniProtKB:Q04837	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	OTUD6A	IPI	UniProtKB:Q14195-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	OTUD6A	IPI	UniProtKB:Q8N1B4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	OTUD6A	IPI	UniProtKB:Q96FJ2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	OTUD6A	IPI	UniProtKB:Q96HA1-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	OTUD6A	IPI	UniProtKB:Q9C029	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	OTUD6A	IPI	UniProtKB:Q9NR12	Human	PMID:32296183
Biological Process	GO:0035871	protein K11-linked deubiquitination	OTUD6A	IDA		Human	PMID:23827681
Biological Process	GO:1990167	protein K27-linked deubiquitination	OTUD6A	IDA		Human	PMID:23827681
Biological Process	GO:0035523	protein K29-linked deubiquitination	OTUD6A	IDA		Human	PMID:23827681
Biological Process	GO:1990168	protein K33-linked deubiquitination	OTUD6A	IDA		Human	PMID:23827681

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern