Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes OSTM1
  • Mouse genes Ostm1
  • Rat genes Ostm1
  • Zfish genes ostm1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ostm1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	OSTM1	IPI	UniProtKB:P51798	Human	PMID:32851177
Molecular Function	GO:0005515	protein binding	Ostm1	IPI	UniProtKB:O70496	Mouse	MGI:MGI:3619836|PMID:16525474
Cellular Component	GO:0034707	chloride channel complex	OSTM1	IPI		Human	PMID:32851177
Cellular Component	GO:0005829	cytosol	Ostm1	IDA		Mouse	PMID:12627228
Biological Process	GO:0030316	osteoclast differentiation	Ostm1	IMP	MGI:MGI:1856885	Mouse	PMID:12627228
Biological Process	GO:0030321	transepithelial chloride transport	OSTM1	IDA		Human	PMID:32851177

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern