Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes OPN5
  • Mouse genes Opn5
  • Rat genes Opn5
  • Zfish genes opn5
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Opn5

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005502	11-cis retinal binding	OPN5	IMP		Human	PMID:22043319
Molecular Function	GO:0005502	11-cis retinal binding	Opn5	IMP		Mouse	MGI:MGI:6230806|PMID:22043319
Molecular Function	GO:0005502	11-cis retinal binding	Opn5	IDA		Mouse	PMID:24403072
Molecular Function	GO:0005502	11-cis retinal binding	opn5	IDA		Zfish	PMID:24403072
Molecular Function	GO:0005503	all-trans retinal binding	opn5	IDA		Zfish	PMID:24403072
Molecular Function	GO:0008020	G protein-coupled photoreceptor activity	Opn5	IMP		Mouse	MGI:MGI:6230806|PMID:22043319
Molecular Function	GO:0004930	G protein-coupled receptor activity	Opn5	IDA		Mouse	PMID:24403072
Cellular Component	GO:0005737	cytoplasm	OPN5	IDA		Human	PMID:30168605
Cellular Component	GO:0005886	plasma membrane	OPN5	IDA		Human	PMID:31380578
Cellular Component	GO:0005886	plasma membrane	OPN5	IDA		Human	PMID:31730232
Biological Process	GO:0016038	absorption of visible light	opn5	IDA		Zfish	PMID:24403072
Biological Process	GO:0071482	cellular response to light stimulus	Opn5	IMP		Mouse	MGI:MGI:6376341|PMID:31607531
Biological Process	GO:0071492	cellular response to UV-A	OPN5	IDA		Human	PMID:31380578
Biological Process	GO:0043153	entrainment of circadian clock by photoperiod	Opn5	IMP		Mouse	MGI:MGI:5699646|PMID:26392540
Biological Process	GO:0043153	entrainment of circadian clock by photoperiod	Opn5	IMP		Mouse	MGI:MGI:6378274|PMID:30240620
Biological Process	GO:0043153	entrainment of circadian clock by photoperiod	Opn5	IMP		Mouse	MGI:MGI:6376341|PMID:31607531
Biological Process	GO:1990384	hyaloid vascular plexus regression	Opn5	IMP		Mouse	MGI:MGI:6359287|PMID:30936473
Biological Process	GO:0007602	phototransduction	Opn5	IMP		Mouse	MGI:MGI:6359287|PMID:30936473
Biological Process	GO:0007604	phototransduction, UV	OPN5	IMP		Human	PMID:22043319
Biological Process	GO:0007604	phototransduction, UV	Opn5	IMP		Mouse	MGI:MGI:6230806|PMID:22043319

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern