Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ODC1
  • Mouse genes Odc1
  • Rat genes Odc1
  • Zfish genes odc1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Odc1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0004586	ornithine decarboxylase activity	ODC1	IDA		Human	PMID:17900240
Molecular Function	GO:0004586	ornithine decarboxylase activity	Odc1	IDA		Mouse	MGI:MGI:5574513|PMID:24967154
Molecular Function	GO:0004586	ornithine decarboxylase activity	Odc1	IDA		Mouse	PMID:8328969
Molecular Function	GO:0004586	ornithine decarboxylase activity	Odc1	IDA		Mouse	PMID:16916800
Molecular Function	GO:0004586	ornithine decarboxylase activity	Odc1	IDA		Rat	PMID:10430362|RGD:1578320
Molecular Function	GO:0004586	ornithine decarboxylase activity	Odc1	IDA		Rat	PMID:1415709|RGD:7242912
Molecular Function	GO:0005515	protein binding	ODC1	IPI	UniProtKB:Q92993	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ODC1	IPI	UniProtKB:Q9H8Y8	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ODC1	IPI	UniProtKB:Q9UMX2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ODC1	IPI	UniProtKB:Q9UMX2	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	ODC1	IPI	UniProtKB:Q9H8Y8	Human	PMID:29892012
Molecular Function	GO:0005515	protein binding	ODC1	IPI	UniProtKB:Q9UMX2	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	ODC1	IPI	UniProtKB:Q92993	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ODC1	IPI	UniProtKB:Q9H8Y8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ODC1	IPI	UniProtKB:Q9UMX2-2	Human	PMID:32296183
Molecular Function	GO:0042803	protein homodimerization activity	Odc1	IDA		Mouse	MGI:MGI:5574513|PMID:24967154
Cellular Component	GO:0005737	cytoplasm	Odc1	IDA		Mouse	MGI:MGI:5582167|PMID:19449338
Cellular Component	GO:0005737	cytoplasm	Odc1	IDA		Rat	PMID:10544213|RGD:7244257
Cellular Component	GO:0005829	cytosol	Odc1	IDA		Mouse	PMID:16916800
Cellular Component	GO:0048471	perinuclear region of cytoplasm	Odc1	IDA		Rat	PMID:10544213|RGD:7244257
Biological Process	GO:0008283	cell population proliferation	Odc1	IMP		Mouse	PMID:16138831
Biological Process	GO:0042462	eye photoreceptor cell development	odc1	IMP	ZFIN:ZDB-GENO-020426-17	Zfish	PMID:15716491
Biological Process	GO:0001822	kidney development	Odc1	IMP		Mouse	PMID:16138831
Biological Process	GO:0006595	polyamine metabolic process	Odc1	IDA		Rat	PMID:10430362|RGD:1578320
Biological Process	GO:0008284	positive regulation of cell population proliferation	Odc1	IMP		Mouse	PMID:16138831
Biological Process	GO:0009446	putrescine biosynthetic process	Odc1	IDA		Rat	PMID:10430362|RGD:1578320
Biological Process	GO:0009446	putrescine biosynthetic process	Odc1	IDA		Rat	PMID:1415709|RGD:7242912
Biological Process	GO:0033387	putrescine biosynthetic process from ornithine	Odc1	IDA		Mouse	MGI:MGI:5574513|PMID:24967154
Biological Process	GO:0042176	regulation of protein catabolic process	Odc1	IDA		Mouse	MGI:MGI:5574513|PMID:24967154
Biological Process	GO:0009615	response to virus	ODC1	IEP		Human	PMID:16548883

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern