Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NUP85
  • Mouse genes Nup85
  • Rat genes Nup85
  • Zfish genes nup85
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Nup85

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	NUP85	IPI	UniProtKB:P55735	Human	PMID:15146057
Molecular Function	GO:0005515	protein binding	NUP85	IPI	UniProtKB:P57740	Human	PMID:15146057
Molecular Function	GO:0005515	protein binding	NUP85	IPI	UniProtKB:Q8NFH3	Human	PMID:15146057
Molecular Function	GO:0005515	protein binding	NUP85	IPI	UniProtKB:Q8NFH4	Human	PMID:15146057
Molecular Function	GO:0005515	protein binding	NUP85	IPI	UniProtKB:Q8WUM0	Human	PMID:15146057
Molecular Function	GO:0005515	protein binding	NUP85	IPI	UniProtKB:Q12769	Human	PMID:24315095
Molecular Function	GO:0005515	protein binding	NUP85	IPI	UniProtKB:Q8WUM0	Human	PMID:24315095
Molecular Function	GO:0005515	protein binding	NUP85	IPI	UniProtKB:Q96EE3	Human	PMID:24315095
Molecular Function	GO:0005515	protein binding	NUP85	IPI	UniProtKB:P41597-2	Human	PMID:25283965
Molecular Function	GO:0005515	protein binding	NUP85	IPI	UniProtKB:Q96EE3	Human	PMID:26391640
Molecular Function	GO:0005515	protein binding	NUP85	IPI	UniProtKB:Q96EE3	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	NUP85	IPI	UniProtKB:Q8WUM0	Human	PMID:27194810
Molecular Function	GO:0005515	protein binding	NUP85	IPI	UniProtKB:Q12769	Human	PMID:30179222
Molecular Function	GO:0005515	protein binding	NUP85	IPI	UniProtKB:Q7L5D6	Human	PMID:32296183
Cellular Component	GO:0005829	cytosol	NUP85	IDA		Human	GO_REF:0000052
Cellular Component	GO:0000776	kinetochore	NUP85	IDA		Human	PMID:15146057
Cellular Component	GO:0016020	membrane	NUP85	HDA		Human	PMID:19946888
Cellular Component	GO:0005635	nuclear envelope	NUP85	IDA		Human	PMID:24315095
Cellular Component	GO:0031080	nuclear pore outer ring	NUP85	IDA		Human	PMID:15146057
Cellular Component	GO:0031080	nuclear pore outer ring	NUP85	IDA		Human	PMID:17360435
Cellular Component	GO:0005654	nucleoplasm	NUP85	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	Nup85	IDA		Rat	PMID:12718872|RGD:10401183
Biological Process	GO:0006935	chemotaxis	Nup85	IDA		Mouse	PMID:15995708
Biological Process	GO:0030032	lamellipodium assembly	Nup85	IDA		Mouse	PMID:15995708
Biological Process	GO:0048246	macrophage chemotaxis	Nup85	IDA		Mouse	PMID:15995708
Biological Process	GO:0072006	nephron development	NUP85	IMP		Human	PMID:30179222

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern