Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NUGGC
  • Mouse genes Nuggc
  • Rat genes Nuggc
  • Zfish genes nuggc.1,nuggc.2,nuggc.3
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Nuggc

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003924	GTPase activity	NUGGC	IDA		Human	PMID:19734146
Cellular Component	GO:0005634	nucleus	Nuggc	IDA		Mouse	PMID:22833677
Biological Process	GO:0071222	cellular response to lipopolysaccharide	NUGGC	IDA		Human	PMID:19734146
Biological Process	GO:0006974	DNA damage response	Nuggc	IMP	MGI:MGI:5449552	Mouse	PMID:22833677
Biological Process	GO:0043066	negative regulation of apoptotic process	NUGGC	IMP		Human	PMID:19734146
Biological Process	GO:0033262	regulation of nuclear cell cycle DNA replication	NUGGC	IMP		Human	PMID:19734146
Biological Process	GO:0016446	somatic hypermutation of immunoglobulin genes	Nuggc	IMP	MGI:MGI:5449552	Mouse	PMID:22833677

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern