Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NUBP1
  • Mouse genes Nubp1
  • Rat genes Nubp1
  • Zfish genes nubp1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Nubp1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0051536	iron-sulfur cluster binding	NUBP1	IDA		Human	PMID:18573874
Molecular Function	GO:0005515	protein binding	NUBP1	IPI	UniProtKB:Q9Y5Y2	Human	PMID:18573874
Molecular Function	GO:0005515	protein binding	Nubp1	IPI	PR:Q9R061	Mouse	PMID:23028652
Molecular Function	GO:0005515	protein binding	Nubp1	IPI	PR:Q9R061	Mouse	PMID:16638812
Molecular Function	GO:0005515	protein binding	Nubp1	IPI	PR:Q9QWT9	Mouse	PMID:16638812
Cellular Component	GO:0005829	cytosol	NUBP1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005829	cytosol	NUBP1	IDA		Human	PMID:18573874
Cellular Component	GO:0005886	plasma membrane	NUBP1	IDA		Human	GO_REF:0000052
Biological Process	GO:0051642	centrosome localization	Nubp1	IMP		Mouse	PMID:23028652
Biological Process	GO:0006879	intracellular iron ion homeostasis	NUBP1	IMP		Human	PMID:18573874
Biological Process	GO:0016226	iron-sulfur cluster assembly	NUBP1	IMP		Human	PMID:18573874
Biological Process	GO:0010826	negative regulation of centrosome duplication	Nubp1	IMP		Mouse	PMID:16638812
Biological Process	GO:0010826	negative regulation of centrosome duplication	Nubp1	IMP		Mouse	PMID:23028652
Biological Process	GO:0072697	protein localization to cell cortex	Nubp1	IMP	MGI:MGI:5463617	Mouse	PMID:23028652
Biological Process	GO:0001558	regulation of cell growth	NUBP1	IMP		Human	PMID:18573874

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern