Comparative GO Graph (mouse, human, rat, zebrafish)

Source

Alliance of Genome Resources

Compare experimental GO annotations for Human-Mouse-Rat-Zebrafish orthologs to Mouse Ntn1

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

This class contains
- Human genes NTN1
- Mouse genes Ntn1
- Rat genes Ntn1
- Zfish genes ntn1a,ntn1b
Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ntn1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	NTN1	IPI	UniProtKB:O94813	Human	PMID:10102268
Molecular Function	GO:0005515	protein binding	NTN1	IPI	UniProtKB:O60469	Human	PMID:19196994
Molecular Function	GO:0005515	protein binding	NTN1	IPI	UniProtKB:P43146	Human	PMID:19721007
Molecular Function	GO:0005515	protein binding	NTN1	IPI	UniProtKB:P43146	Human	PMID:20434207
Molecular Function	GO:0005515	protein binding	NTN1	IPI	UniProtKB:P43146	Human	PMID:26190107
Molecular Function	GO:0005515	protein binding	NTN1	IPI	UniProtKB:Q8IZJ1-2	Human	PMID:26190107
Molecular Function	GO:0005515	protein binding	NTN1	IPI	UniProtKB:Q8NBI3	Human	PMID:26190107
Molecular Function	GO:0005515	protein binding	NTN1	IPI	UniProtKB:P05067:PRO_0000000089	Human	PMID:28501620
Molecular Function	GO:0005515	protein binding	NTN1	IPI	UniProtKB:P05067:PRO_0000000092	Human	PMID:28501620
Molecular Function	GO:0005515	protein binding	Ntn1	IPI	UniProtKB:Q8K1S3-1	Mouse	MGI:MGI:5771592\|PMID:26859457
Molecular Function	GO:0005515	protein binding	Ntn1	IPI	UniProtKB:P12023	Mouse	MGI:MGI:6274971\|PMID:22685302
Molecular Function	GO:0005515	protein binding	Ntn1	IPI	UniProtKB:Q9ERC8	Mouse	MGI:MGI:3829111\|PMID:18585357
Molecular Function	GO:0005515	protein binding	Ntn1	IPI	PR:Q8K1S2	Mouse	PMID:21673655
Cellular Component	GO:0015629	actin cytoskeleton	NTN1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005604	basement membrane	Ntn1	IDA		Mouse	PMID:18757743
Cellular Component	GO:0062023	collagen-containing extracellular matrix	Ntn1	HDA		Mouse	MGI:MGI:6201834\|PMID:22159717
Cellular Component	GO:0005737	cytoplasm	Ntn1	IDA		Mouse	PMID:18425773
Cellular Component	GO:0005829	cytosol	NTN1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0031012	extracellular matrix	Ntn1	IDA		Rat	PMID:11356879\|RGD:633501
Cellular Component	GO:0005576	extracellular region	NTN1	IDA		Human	PMID:28945198
Cellular Component	GO:0005654	nucleoplasm	NTN1	IDA		Human	GO_REF:0000052
Biological Process	GO:0001525	angiogenesis	ntn1a	IMP	ZFIN:ZDB-MRPHLNO-060810-1	Zfish	PMID:16809490
Biological Process	GO:0001525	angiogenesis	ntn1a	IMP	ZFIN:ZDB-MRPHLNO-041214-1	Zfish	PMID:21172653
Biological Process	GO:0001525	angiogenesis	ntn1a	IMP	ZFIN:ZDB-MRPHLNO-041214-1	Zfish	PMID:19386270
Biological Process	GO:0001525	angiogenesis	ntn1a	IMP	ZFIN:ZDB-MRPHLNO-110623-2	Zfish	PMID:19386270
Biological Process	GO:0021960	anterior commissure morphogenesis	ntn1b	IMP	ZFIN:ZDB-MRPHLNO-070328-6	Zfish	PMID:22956848
Biological Process	GO:0021960	anterior commissure morphogenesis	ntn1b	IGI	ZFIN:ZDB-MRPHLNO-070328-6,ZFIN:ZDB-MRPHLNO-120604-2	Zfish	PMID:22956848
Biological Process	GO:0021960	anterior commissure morphogenesis	ntn1a	IMP	ZFIN:ZDB-MRPHLNO-120604-2	Zfish	PMID:22956848
Biological Process	GO:0021960	anterior commissure morphogenesis	ntn1a	IGI	ZFIN:ZDB-MRPHLNO-070328-6,ZFIN:ZDB-MRPHLNO-120604-2	Zfish	PMID:22956848
Biological Process	GO:0033564	anterior/posterior axon guidance	Ntn1	IMP		Mouse	PMID:18479186
Biological Process	GO:0033564	anterior/posterior axon guidance	ntn1a	IMP	ZFIN:ZDB-MRPHLNO-060810-1	Zfish	PMID:19605629
Biological Process	GO:0048846	axon extension involved in axon guidance	ntn1a	IMP	ZFIN:ZDB-MRPHLNO-060810-1	Zfish	PMID:21828101
Biological Process	GO:0007411	axon guidance	Ntn1	IDA		Mouse	PMID:12051827
Biological Process	GO:0007411	axon guidance	Ntn1	IMP	MGI:MGI:1927548	Mouse	PMID:10908620
Biological Process	GO:0007411	axon guidance	Ntn1	IDA		Mouse	PMID:17086203
Biological Process	GO:0007411	axon guidance	Ntn1	IMP	MGI:MGI:1927548	Mouse	PMID:17898206
Biological Process	GO:0007411	axon guidance	Ntn1	IMP	MGI:MGI:1927548	Mouse	PMID:16481423
Biological Process	GO:0007411	axon guidance	Ntn1	IDA		Mouse	PMID:12679031
Biological Process	GO:0007409	axonogenesis	Ntn1	IDA		Mouse	PMID:10908620
Biological Process	GO:0001569	branching involved in blood vessel morphogenesis	ntn1a	IMP		Zfish	PMID:15510105
Biological Process	GO:0032488	Cdc42 protein signal transduction	Ntn1	IDA		Rat	PMID:23453953\|RGD:10054078
Biological Process	GO:0008283	cell population proliferation	Ntn1	IMP	MGI:MGI:1927548	Mouse	PMID:16481423
Biological Process	GO:0098609	cell-cell adhesion	Ntn1	IGI	MGI:MGI:1315205	Mouse	PMID:16439476
Biological Process	GO:0021952	central nervous system projection neuron axonogenesis	ntn1b	IGI	ZFIN:ZDB-MRPHLNO-070328-6,ZFIN:ZDB-MRPHLNO-120604-2,ZFIN:ZDB-MRPHLNO-121016-3	Zfish	PMID:22956848
Biological Process	GO:0021952	central nervous system projection neuron axonogenesis	ntn1b	IGI	ZFIN:ZDB-MRPHLNO-070328-6,ZFIN:ZDB-MRPHLNO-120604-2	Zfish	PMID:22956848
Biological Process	GO:0021952	central nervous system projection neuron axonogenesis	ntn1a	IGI	ZFIN:ZDB-MRPHLNO-070328-6,ZFIN:ZDB-MRPHLNO-120604-2,ZFIN:ZDB-MRPHLNO-121016-3	Zfish	PMID:22956848
Biological Process	GO:0021952	central nervous system projection neuron axonogenesis	ntn1a	IGI	ZFIN:ZDB-MRPHLNO-070328-6,ZFIN:ZDB-MRPHLNO-120604-2	Zfish	PMID:22956848
Biological Process	GO:0061643	chemorepulsion of axon	Ntn1	IDA		Mouse	MGI:MGI:5906064\|PMID:28483977
Biological Process	GO:0061386	closure of optic fissure	ntn1a	IMP	ZFIN:ZDB-MRPHLNO-190807-1	Zfish	PMID:30733552
Biological Process	GO:0061386	closure of optic fissure	ntn1a	IMP	ZFIN:ZDB-MRPHLNO-190807-1	Zfish	PMID:31162046
Biological Process	GO:0061386	closure of optic fissure	ntn1a	IMP	ZFIN:ZDB-GENO-200319-18	Zfish	PMID:31162046
Biological Process	GO:0016358	dendrite development	ntn1b	IGI	ZFIN:ZDB-MRPHLNO-060810-1,ZFIN:ZDB-MRPHLNO-070328-6	Zfish	PMID:17182783
Biological Process	GO:0016358	dendrite development	ntn1a	IGI	ZFIN:ZDB-MRPHLNO-060810-1,ZFIN:ZDB-MRPHLNO-070328-6	Zfish	PMID:17182783
Biological Process	GO:0014009	glial cell proliferation	Ntn1	IMP	MGI:MGI:1927548	Mouse	PMID:16481423
Biological Process	GO:0003146	heart jogging	ntn1a	IMP	ZFIN:ZDB-MRPHLNO-060810-1	Zfish	PMID:25353184
Biological Process	GO:0001947	heart looping	ntn1a	IMP	ZFIN:ZDB-MRPHLNO-060810-1	Zfish	PMID:25353184
Biological Process	GO:0042472	inner ear morphogenesis	Ntn1	IMP	MGI:MGI:2137018	Mouse	PMID:17616930
Biological Process	GO:0030879	mammary gland development	Ntn1	IGI	MGI:MGI:97762	Mouse	PMID:18425773
Biological Process	GO:0060603	mammary gland duct morphogenesis	Ntn1	IGI	MGI:MGI:1315205	Mouse	PMID:16439476
Biological Process	GO:0097475	motor neuron migration	Ntn1	IMP	MGI:MGI:1927548	Mouse	PMID:16267219
Biological Process	GO:0016525	negative regulation of angiogenesis	ntn1a	IMP		Zfish	PMID:15510105
Biological Process	GO:0030517	negative regulation of axon extension	Ntn1	IDA		Mouse	PMID:10704383
Biological Process	GO:0048665	neuron fate specification	ntn1a	IMP	ZFIN:ZDB-MRPHLNO-060810-1	Zfish	PMID:22003409
Biological Process	GO:0001764	neuron migration	Ntn1	IMP	MGI:MGI:1927548	Mouse	PMID:14750959
Biological Process	GO:0007097	nuclear migration	Ntn1	IDA		Mouse	PMID:12051827
Biological Process	GO:0071678	olfactory bulb axon guidance	ntn1b	IMP	ZFIN:ZDB-MRPHLNO-070328-6	Zfish	PMID:22457493
Biological Process	GO:0071678	olfactory bulb axon guidance	ntn1b	IGI	ZFIN:ZDB-MRPHLNO-070328-5,ZFIN:ZDB-MRPHLNO-070328-6	Zfish	PMID:22457493
Biological Process	GO:0071678	olfactory bulb axon guidance	ntn1b	IGI	ZFIN:ZDB-MRPHLNO-070328-6	Zfish	PMID:22457493
Biological Process	GO:0071678	olfactory bulb axon guidance	ntn1b	IGI	ZFIN:ZDB-MRPHLNO-060810-1,ZFIN:ZDB-MRPHLNO-070328-6	Zfish	PMID:22457493
Biological Process	GO:0071678	olfactory bulb axon guidance	ntn1a	IGI	ZFIN:ZDB-MRPHLNO-060810-1,ZFIN:ZDB-MRPHLNO-070328-6	Zfish	PMID:22457493
Biological Process	GO:0071678	olfactory bulb axon guidance	ntn1a	IGI	ZFIN:ZDB-MRPHLNO-060810-1,ZFIN:ZDB-MRPHLNO-070328-5	Zfish	PMID:22457493
Biological Process	GO:0071678	olfactory bulb axon guidance	ntn1a	IMP	ZFIN:ZDB-MRPHLNO-060810-1	Zfish	PMID:22457493
Biological Process	GO:0061626	pharyngeal arch artery morphogenesis	ntn1a	IMP	ZFIN:ZDB-MRPHLNO-060810-1	Zfish	PMID:25353184
Biological Process	GO:0045773	positive regulation of axon extension	Ntn1	IDA		Mouse	PMID:10704383
Biological Process	GO:0045773	positive regulation of axon extension	Ntn1	IDA		Rat	PMID:23453953\|RGD:10054078
Biological Process	GO:2000147	positive regulation of cell motility	Ntn1	IDA		Rat	PMID:23453953\|RGD:10054078
Biological Process	GO:0060252	positive regulation of glial cell proliferation	Ntn1	IMP	MGI:MGI:1927548	Mouse	PMID:16481423
Biological Process	GO:0007265	Ras protein signal transduction	Ntn1	IDA		Rat	PMID:23453953\|RGD:10054078
Biological Process	GO:0030516	regulation of axon extension	ntn1b	IGI	ZFIN:ZDB-MRPHLNO-070328-5,ZFIN:ZDB-MRPHLNO-070328-6,ZFIN:ZDB-MRPHLNO-120604-2	Zfish	PMID:22606267
Biological Process	GO:0030516	regulation of axon extension	ntn1a	IGI	ZFIN:ZDB-MRPHLNO-070328-5,ZFIN:ZDB-MRPHLNO-070328-6,ZFIN:ZDB-MRPHLNO-120604-2	Zfish	PMID:22606267
Biological Process	GO:0030334	regulation of cell migration	Ntn1	IDA		Mouse	PMID:10704383
Biological Process	GO:1903975	regulation of glial cell migration	Ntn1	IMP	MGI:MGI:1927548	Mouse	PMID:16481423
Biological Process	GO:0051963	regulation of synapse assembly	Ntn1	IDA		Mouse	PMID:24174661
Biological Process	GO:0051963	regulation of synapse assembly	Ntn1	IMP		Mouse	PMID:24174661
Biological Process	GO:0051963	regulation of synapse assembly	Ntn1	EXP		Mouse	PMID:24174661
Biological Process	GO:0006930	substrate-dependent cell migration, cell extension	Ntn1	IDA		Rat	PMID:23453953\|RGD:10054078
Biological Process	GO:0030878	thyroid gland development	ntn1a	IMP	ZFIN:ZDB-MRPHLNO-060810-1	Zfish	PMID:25353184
Biological Process	GO:0001944	vasculature development	ntn1a	IMP	ZFIN:ZDB-MRPHLNO-120604-2	Zfish	PMID:25656845
Biological Process	GO:0035908	ventral aorta development	ntn1a	IMP	ZFIN:ZDB-MRPHLNO-060810-1	Zfish	PMID:25353184

Gene Ontology Evidence Code Abbreviations:

EXP Inferred from experiment

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

HTP Inferred from High Throughput Experiment

HDA Inferred from High Throughput Direct Assay

HMP Inferred from High Throughput Mutant Phenotype

HGI Inferred from High Throughput Genetic Interaction

HEP Inferred from High Throughput Expression Pattern

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 05/14/2024 MGI 6.23

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023. Complete table of the annotations represented in this image is provided below.

Molecular Function

Cellular Component

Biological Process

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.