Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NSUN5,NSUN5P1,NSUN5P2
  • Mouse genes Nsun5
  • Rat genes Nsun5
  • Zfish genes nsun5
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Nsun5

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003723	RNA binding	NSUN5	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	NSUN5	HDA		Human	PMID:22681889
Molecular Function	GO:0009383	rRNA (cytosine-C5-)-methyltransferase activity	NSUN5	IDA		Human	PMID:31428936
Molecular Function	GO:0009383	rRNA (cytosine-C5-)-methyltransferase activity	NSUN5	IDA		Human	PMID:31722427
Molecular Function	GO:0009383	rRNA (cytosine-C5-)-methyltransferase activity	Nsun5	IDA		Mouse	MGI:MGI:6414744|PMID:31722427
Cellular Component	GO:0005730	nucleolus	NSUN5	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005730	nucleolus	NSUN5	IDA		Human	PMID:31722427
Cellular Component	GO:0005654	nucleoplasm	NSUN5	IDA		Human	GO_REF:0000052
Biological Process	GO:0021987	cerebral cortex development	Nsun5	IMP		Mouse	MGI:MGI:6369928|PMID:31462248
Biological Process	GO:0050890	cognition	Nsun5	IMP		Mouse	MGI:MGI:6280591|PMID:30485550
Biological Process	GO:0022038	corpus callosum development	Nsun5	IMP		Mouse	MGI:MGI:6359541|PMID:31174389
Biological Process	GO:0014003	oligodendrocyte development	Nsun5	IMP		Mouse	MGI:MGI:6280591|PMID:30485550
Biological Process	GO:0014003	oligodendrocyte development	Nsun5	IMP		Mouse	MGI:MGI:6359541|PMID:31174389
Biological Process	GO:0045727	positive regulation of translation	NSUN5	IMP		Human	PMID:31428936
Biological Process	GO:0045727	positive regulation of translation	NSUN5	IMP		Human	PMID:31722427
Biological Process	GO:0031641	regulation of myelination	Nsun5	IMP		Mouse	MGI:MGI:6359541|PMID:31174389
Biological Process	GO:0070475	rRNA base methylation	NSUN5	IDA		Human	PMID:31428936
Biological Process	GO:0070475	rRNA base methylation	NSUN5	IDA		Human	PMID:31722427
Biological Process	GO:0070475	rRNA base methylation	Nsun5	IDA		Mouse	MGI:MGI:6414744|PMID:31722427

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern