Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NIPSNAP1
  • Mouse genes Nipsnap1
  • Rat genes Nipsnap1
  • Zfish genes nipsnap1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Nipsnap1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042165	neurotransmitter binding	Nipsnap1	IDA		Mouse	PMID:22311985
Molecular Function	GO:0005515	protein binding	NIPSNAP1	IPI	UniProtKB:O95166	Human	PMID:25126726
Molecular Function	GO:0005515	protein binding	Nipsnap1	IPI	PR:Q9CPQ3	Mouse	PMID:20497468
Molecular Function	GO:0005515	protein binding	Nipsnap1	IPI	PR:P12023	Mouse	PMID:20497468
Cellular Component	GO:0016020	membrane	Nipsnap1	IDA		Mouse	PMID:22311985
Cellular Component	GO:0005743	mitochondrial inner membrane	Nipsnap1	HDA		Mouse	PMID:12865426
Cellular Component	GO:0005739	mitochondrion	Nipsnap1	IDA		Mouse	MGI:MGI:2682130|PMID:14651853
Cellular Component	GO:0005739	mitochondrion	Nipsnap1	IDA		Mouse	PMID:22311985
Cellular Component	GO:0005739	mitochondrion	Nipsnap1	IDA		Mouse	PMID:20497468
Cellular Component	GO:0005739	mitochondrion	Nipsnap1	HDA		Mouse	PMID:14651853
Cellular Component	GO:0005739	mitochondrion	Nipsnap1	HDA		Mouse	PMID:18614015
Cellular Component	GO:0097060	synaptic membrane	Nipsnap1	IDA		Mouse	PMID:22311985
Biological Process	GO:0019233	sensory perception of pain	Nipsnap1	IMP	MGI:MGI:5319314	Mouse	PMID:22311985

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern