Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NECAP1
  • Mouse genes Necap1
  • Rat genes Necap1
  • Zfish genes necap1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Necap1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	NECAP1	IPI	UniProtKB:Q10567-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Necap1	IPI	UniProtKB:P17426|UniProtKB:P22892	Mouse	MGI:MGI:3688370|PMID:14555962
Molecular Function	GO:0005515	protein binding	Necap1	IPI	UniProtKB:O08838|UniProtKB:O08839|UniProtKB:P63010|UniProtKB:Q8K285	Mouse	MGI:MGI:5917753|PMID:24130457
Molecular Function	GO:0005515	protein binding	Necap1	IPI	UniProtKB:O00291|UniProtKB:O08838|UniProtKB:O08839|UniProtKB:O60641|UniProtKB:P49418|UniProtKB:P98078	Mouse	MGI:MGI:5508601|PMID:17762867
Molecular Function	GO:0005515	protein binding	Necap1	IPI	UniProtKB:P49418	Rat	PMID:17762867|RGD:8554310
Cellular Component	GO:0030125	clathrin vesicle coat	Necap1	IDA		Mouse	MGI:MGI:3688370|PMID:14555962
Cellular Component	GO:0005905	clathrin-coated pit	Necap1	IDA		Mouse	MGI:MGI:3688370|PMID:14555962
Cellular Component	GO:0098793	presynapse	Necap1	IDA		Rat	PMID:16879712|RGD:155230804
Biological Process	GO:0006897	endocytosis	Necap1	IMP		Mouse	MGI:MGI:3688370|PMID:14555962
Biological Process	GO:0140238	presynaptic endocytosis	Necap1	IDA		Rat	PMID:24130457|RGD:13432276
Biological Process	GO:0140238	presynaptic endocytosis	Necap1	IMP		Rat	PMID:24130457|RGD:13432276

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern