Comparative GO Graph (mouse, human, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NECAB3
  • Mouse genes Necab3
  • Rat genes
  • Zfish genes necab3
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Necab3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	NECAB3	IPI	UniProtKB:Q99767	Human	PMID:10833507
Molecular Function	GO:0005515	protein binding	NECAB3	IPI	UniProtKB:O96018	Human	PMID:26948053
Molecular Function	GO:0005515	protein binding	Necab3	IPI	PR:P98084	Mouse	PMID:10833507
Molecular Function	GO:0005515	protein binding	Necab3	IPI	PR:O35942	Mouse	PMID:14697346
Cellular Component	GO:0005737	cytoplasm	NECAB3	IDA		Human	PMID:10833507
Cellular Component	GO:0005783	endoplasmic reticulum	Necab3	IDA		Mouse	PMID:14697346
Cellular Component	GO:0005783	endoplasmic reticulum	Necab3	IDA		Mouse	PMID:10833507
Cellular Component	GO:0005789	endoplasmic reticulum membrane	NECAB3	IDA		Human	PMID:10833507
Cellular Component	GO:0005794	Golgi apparatus	NECAB3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0000137	Golgi cis cisterna	NECAB3	IDA		Human	PMID:10833507
Cellular Component	GO:0000137	Golgi cis cisterna	Necab3	IDA		Mouse	PMID:14697346
Cellular Component	GO:0000137	Golgi cis cisterna	Necab3	IDA		Mouse	PMID:10833507
Biological Process	GO:0019538	protein metabolic process	NECAB3	IDA		Human	PMID:12780348
Biological Process	GO:0042984	regulation of amyloid precursor protein biosynthetic process	NECAB3	IDA		Human	PMID:10833507

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern