Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NCR1
  • Mouse genes Ncr1
  • Rat genes Ncr1
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ncr1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	NCR1	IPI	UniProtKB:P08670	Human	PMID:17056548
Molecular Function	GO:0005515	protein binding	NCR1	IPI	UniProtKB:P27918:PRO_0000035863	Human	PMID:28480349
Molecular Function	GO:0005515	protein binding	Ncr1	IPI	UniProtKB:P27918|UniProtKB:P27918:PRO_0000035863	Mouse	MGI:MGI:6093311|PMID:28480349
Cellular Component	GO:0009986	cell surface	Ncr1	IDA		Mouse	PMID:20818394
Biological Process	GO:0051607	defense response to virus	Ncr1	IMP	MGI:MGI:3664443	Mouse	PMID:22615821
Biological Process	GO:0009597	detection of virus	Ncr1	IMP	MGI:MGI:3664443	Mouse	PMID:22615821

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern