Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NCBP3
  • Mouse genes Ncbp3
  • Rat genes Ncbp3
  • Zfish genes ncbp3
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ncbp3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003729	mRNA binding	NCBP3	IDA		Human	PMID:26382858
Molecular Function	GO:0005515	protein binding	NCBP3	IPI	UniProtKB:Q09161	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	NCBP3	IPI	UniProtKB:O00505	Human	PMID:26382858
Molecular Function	GO:0005515	protein binding	NCBP3	IPI	UniProtKB:O00629	Human	PMID:26382858
Molecular Function	GO:0005515	protein binding	NCBP3	IPI	UniProtKB:P38919	Human	PMID:26382858
Molecular Function	GO:0005515	protein binding	NCBP3	IPI	UniProtKB:Q09161	Human	PMID:26382858
Molecular Function	GO:0005515	protein binding	NCBP3	IPI	UniProtKB:Q13769	Human	PMID:26382858
Molecular Function	GO:0005515	protein binding	NCBP3	IPI	UniProtKB:Q96PV6	Human	PMID:26382858
Molecular Function	GO:0005515	protein binding	NCBP3	IPI	UniProtKB:Q9BXP5	Human	PMID:26382858
Molecular Function	GO:0005515	protein binding	NCBP3	IPI	UniProtKB:O00629	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NCBP3	IPI	UniProtKB:Q96PV6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NCBP3	IPI	UniProtKB:O00629	Human	PMID:32960270
Molecular Function	GO:0005515	protein binding	NCBP3	IPI	UniProtKB:Q09161	Human	PMID:32960270
Molecular Function	GO:0005515	protein binding	NCBP3	IPI	UniProtKB:Q96PV6	Human	PMID:32960270
Molecular Function	GO:0000340	RNA 7-methylguanosine cap binding	NCBP3	IMP		Human	PMID:26382858
Molecular Function	GO:0003723	RNA binding	NCBP3	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	NCBP3	HDA		Human	PMID:22681889
Molecular Function	GO:0000339	RNA cap binding	Ncbp3	IDA		Mouse	MGI:MGI:5699485|PMID:26382858
Cellular Component	GO:0005737	cytoplasm	NCBP3	IDA		Human	PMID:26382858
Cellular Component	GO:0005845	mRNA cap binding complex	NCBP3	IPI		Human	PMID:26382858
Cellular Component	GO:0005846	nuclear cap binding complex	NCBP3	IPI		Human	PMID:26382858
Cellular Component	GO:0016607	nuclear speck	NCBP3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	NCBP3	IDA		Human	PMID:26382858
Biological Process	GO:0051607	defense response to virus	NCBP3	IMP		Human	PMID:26382858
Biological Process	GO:0006406	mRNA export from nucleus	NCBP3	IMP		Human	PMID:26382858
Biological Process	GO:0006408	snRNA export from nucleus	NCBP3	IMP		Human	PMID:26382858

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern