Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes MMS19
  • Mouse genes Mms19
  • Rat genes Mms19
  • Zfish genes mms19
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Mms19

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0019899	enzyme binding	Mms19	IPI	UniProtKB:Q0VGM9	Mouse	MGI:MGI:5522574|PMID:24115439
Molecular Function	GO:0030331	nuclear estrogen receptor binding	MMS19	IPI	UniProtKB:P03372	Human	PMID:11279242
Molecular Function	GO:0030331	nuclear estrogen receptor binding	MMS19	IPI	UniProtKB:Q92731	Human	PMID:11279242
Molecular Function	GO:0005515	protein binding	MMS19	IPI	UniProtKB:Q9Y6Q9	Human	PMID:11279242
Molecular Function	GO:0005515	protein binding	MMS19	IPI	UniProtKB:Q9Y3D0	Human	PMID:20797633
Molecular Function	GO:0005515	protein binding	MMS19	IPI	UniProtKB:O76071	Human	PMID:21516116
Molecular Function	GO:0005515	protein binding	MMS19	IPI	UniProtKB:O76071	Human	PMID:23585563
Molecular Function	GO:0005515	protein binding	MMS19	IPI	UniProtKB:P18074	Human	PMID:23585563
Molecular Function	GO:0005515	protein binding	MMS19	IPI	UniProtKB:Q9BX63	Human	PMID:23585563
Molecular Function	GO:0005515	protein binding	MMS19	IPI	UniProtKB:Q9BX63|UniProtKB:Q9H6Q4,UniProtKB:Q9Y3D0|UniProtKB:Q9NZ71	Human	PMID:23585563
Molecular Function	GO:0005515	protein binding	MMS19	IPI	UniProtKB:Q9H6Q4	Human	PMID:23585563
Molecular Function	GO:0005515	protein binding	MMS19	IPI	UniProtKB:Q9NZ71	Human	PMID:23585563
Molecular Function	GO:0005515	protein binding	MMS19	IPI	UniProtKB:Q9Y3D0	Human	PMID:23585563
Molecular Function	GO:0005515	protein binding	MMS19	IPI	UniProtKB:O76071,UniProtKB:Q9Y3D0	Human	PMID:23891004
Molecular Function	GO:0005515	protein binding	MMS19	IPI	UniProtKB:O76071	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	MMS19	IPI	UniProtKB:O76071	Human	PMID:28178521
Molecular Function	GO:0005515	protein binding	MMS19	IPI	UniProtKB:P18074	Human	PMID:28178521
Molecular Function	GO:0005515	protein binding	MMS19	IPI	UniProtKB:Q9NZ71	Human	PMID:28178521
Molecular Function	GO:0005515	protein binding	MMS19	IPI	UniProtKB:Q9Y3D0	Human	PMID:28178521
Molecular Function	GO:0005515	protein binding	MMS19	IPI	UniProtKB:O76071	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	MMS19	IPI	UniProtKB:Q9Y3D0	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	MMS19	IPI	UniProtKB:Q9Y3D0	Human	PMID:30742009
Molecular Function	GO:0003713	transcription coactivator activity	MMS19	IMP		Human	PMID:11279242
Cellular Component	GO:0097361	CIA complex	MMS19	IDA		Human	PMID:22678361
Cellular Component	GO:0097361	CIA complex	MMS19	IDA		Human	PMID:22678362
Cellular Component	GO:0097361	CIA complex	MMS19	IDA		Human	PMID:23585563
Cellular Component	GO:0005737	cytoplasm	MMS19	IDA		Human	PMID:20797633
Cellular Component	GO:0005737	cytoplasm	MMS19	IDA		Human	PMID:22678361
Cellular Component	GO:0005829	cytosol	MMS19	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016020	membrane	MMS19	HDA		Human	PMID:19946888
Cellular Component	GO:0071817	MMXD complex	MMS19	IDA		Human	PMID:20797633
Cellular Component	GO:0005654	nucleoplasm	MMS19	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	MMS19	IDA		Human	PMID:20797633
Cellular Component	GO:0005819	spindle	MMS19	IDA		Human	PMID:20797633
Biological Process	GO:0007059	chromosome segregation	MMS19	IMP		Human	PMID:20797633
Biological Process	GO:0006974	DNA damage response	MMS19	IMP		Human	PMID:22678362
Biological Process	GO:0006259	DNA metabolic process	MMS19	IMP		Human	PMID:22678361
Biological Process	GO:0006281	DNA repair	MMS19	IMP		Human	PMID:22678362
Biological Process	GO:0016226	iron-sulfur cluster assembly	MMS19	IMP		Human	PMID:22678361
Biological Process	GO:0016226	iron-sulfur cluster assembly	MMS19	IMP		Human	PMID:22678362
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	MMS19	IMP		Human	PMID:11279242
Biological Process	GO:1905168	positive regulation of double-strand break repair via homologous recombination	MMS19	IDA		Human	PMID:29225034
Biological Process	GO:0097428	protein maturation by iron-sulfur cluster transfer	MMS19	IDA		Human	PMID:29225034

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern