Comparative GO Graph (mouse, human)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes MALAT1
  • Mouse genes Malat1
  • Rat genes
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Malat1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	Malat1	IPI	PR:Q8CIN6	Mouse	PMID:25145264
Molecular Function	GO:0044877	protein-containing complex binding	Malat1	IDA		Mouse	PMID:21172659
Cellular Component	GO:0097441	basal dendrite	Malat1	IDA		Mouse	PMID:28819115
Cellular Component	GO:0016604	nuclear body	Malat1	IDA		Mouse	PMID:25145264
Cellular Component	GO:0016607	nuclear speck	Malat1	IDA		Mouse	PMID:22840402
Cellular Component	GO:0016607	nuclear speck	Malat1	IDA		Mouse	PMID:20797886
Cellular Component	GO:0016607	nuclear speck	Malat1	IDA		Mouse	PMID:20729808
Cellular Component	GO:0016607	nuclear speck	Malat1	IDA		Mouse	PMID:21444682
Biological Process	GO:2000288	positive regulation of myoblast proliferation	Malat1	IMP		Mouse	PMID:23485710
Biological Process	GO:0000381	regulation of alternative mRNA splicing, via spliceosome	Malat1	IMP		Mouse	PMID:20797886
Biological Process	GO:0050807	regulation of synapse organization	Malat1	IMP		Mouse	PMID:20729808

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern