Comparative GO Graph (mouse, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes
  • Mouse genes Ly6a
  • Rat genes Ly6c,Ly6i
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ly6a

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	Ly6a	IPI	UniProtKB:Q64729	Mouse	MGI:MGI:5004986|PMID:21518866
Cellular Component	GO:0009897	external side of plasma membrane	Ly6a	IDA		Mouse	PMID:21508411
Cellular Component	GO:0009897	external side of plasma membrane	Ly6a	IDA		Mouse	PMID:21708977
Cellular Component	GO:0009897	external side of plasma membrane	Ly6a	IDA		Mouse	PMID:18971422
Cellular Component	GO:0009897	external side of plasma membrane	Ly6a	IDA		Mouse	PMID:16455951
Cellular Component	GO:0009897	external side of plasma membrane	Ly6a	IDA		Mouse	PMID:20660734
Cellular Component	GO:0009897	external side of plasma membrane	Ly6a	IDA		Mouse	PMID:12935903
Cellular Component	GO:0009897	external side of plasma membrane	Ly6a	IDA		Mouse	PMID:20103531
Cellular Component	GO:0009897	external side of plasma membrane	Ly6a	IDA		Mouse	PMID:12714519
Cellular Component	GO:0005622	intracellular anatomical structure	Ly6a	IDA		Mouse	PMID:11146504
Biological Process	GO:0009617	response to bacterium	Ly6a	IEP		Mouse	PMID:23012479

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern