Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes LSM7
  • Mouse genes Lsm7
  • Rat genes Lsm7
  • Zfish genes lsm7
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Lsm7

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	LSM7	IPI	UniProtKB:O75410-1	Human	PMID:12165861
Molecular Function	GO:0005515	protein binding	LSM7	IPI	UniProtKB:O75410-6	Human	PMID:12165861
Molecular Function	GO:0005515	protein binding	LSM7	IPI	UniProtKB:O75410-6	Human	PMID:14603251
Molecular Function	GO:0005515	protein binding	LSM7	IPI	UniProtKB:Q9Y333	Human	PMID:14667819
Molecular Function	GO:0005515	protein binding	LSM7	IPI	UniProtKB:P62310	Human	PMID:15231747
Molecular Function	GO:0005515	protein binding	LSM7	IPI	UniProtKB:P62312	Human	PMID:15231747
Molecular Function	GO:0005515	protein binding	LSM7	IPI	UniProtKB:P62318	Human	PMID:15231747
Molecular Function	GO:0005515	protein binding	LSM7	IPI	UniProtKB:Q9Y333	Human	PMID:15231747
Molecular Function	GO:0005515	protein binding	LSM7	IPI	UniProtKB:Q9Y4Y9	Human	PMID:15231747
Molecular Function	GO:0005515	protein binding	LSM7	IPI	UniProtKB:Q9Y4Z0	Human	PMID:15231747
Molecular Function	GO:0005515	protein binding	LSM7	IPI	UniProtKB:Q9Y333	Human	PMID:19628699
Molecular Function	GO:0005515	protein binding	LSM7	IPI	UniProtKB:P62318	Human	PMID:21988832
Molecular Function	GO:0005515	protein binding	LSM7	IPI	UniProtKB:Q9Y4Z0	Human	PMID:21988832
Molecular Function	GO:0005515	protein binding	LSM7	IPI	UniProtKB:P62306	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	LSM7	IPI	UniProtKB:P62310	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	LSM7	IPI	UniProtKB:P62312	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	LSM7	IPI	UniProtKB:P62318	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	LSM7	IPI	UniProtKB:Q9Y333	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	LSM7	IPI	UniProtKB:Q9Y4Y9	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	LSM7	IPI	UniProtKB:Q9Y4Z0	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	LSM7	IPI	UniProtKB:Q96D03	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	LSM7	IPI	UniProtKB:Q9Y4Y9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	LSM7	IPI	UniProtKB:P62312	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	LSM7	IPI	UniProtKB:Q96D03	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	LSM7	IPI	UniProtKB:Q9Y4Y9	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	LSM7	IPI	UniProtKB:O95988	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LSM7	IPI	UniProtKB:P62306	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LSM7	IPI	UniProtKB:P62310	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LSM7	IPI	UniProtKB:Q96D03	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LSM7	IPI	UniProtKB:Q9BSW7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LSM7	IPI	UniProtKB:Q9Y333	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LSM7	IPI	UniProtKB:Q9Y4Y9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LSM7	IPI	UniProtKB:Q9Y4Z0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Lsm7	IPI	PR:P62322	Mouse	PMID:11591653
Cellular Component	GO:0120115	Lsm2-8 complex	LSM7	IDA		Human	PMID:10523320
Cellular Component	GO:0005634	nucleus	LSM7	IDA		Human	PMID:26912367
Cellular Component	GO:0071005	U2-type precatalytic spliceosome	LSM7	IDA		Human	PMID:28781166
Cellular Component	GO:0046540	U4/U6 x U5 tri-snRNP complex	LSM7	IPI		Human	PMID:30975767
Cellular Component	GO:0046540	U4/U6 x U5 tri-snRNP complex	LSM7	IDA		Human	PMID:26912367
Biological Process	GO:0000398	mRNA splicing, via spliceosome	LSM7	IDA		Human	PMID:28781166

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern