Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes LSM10
  • Mouse genes Lsm10
  • Rat genes Lsm10
  • Zfish genes lsm10
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Lsm10

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0071208	histone pre-mRNA DCP binding	Lsm10	IDA		Mouse	MGI:MGI:4353869|PMID:19470752
Molecular Function	GO:0005515	protein binding	LSM10	IPI	UniProtKB:P83369	Human	PMID:12975319
Molecular Function	GO:0005515	protein binding	LSM10	IPI	UniProtKB:P62310	Human	PMID:15231747
Molecular Function	GO:0005515	protein binding	LSM10	IPI	UniProtKB:P54105	Human	PMID:16087681
Molecular Function	GO:0005515	protein binding	LSM10	IPI	UniProtKB:Q16637	Human	PMID:16087681
Molecular Function	GO:0005515	protein binding	LSM10	IPI	UniProtKB:P62310	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	LSM10	IPI	UniProtKB:P62310	Human	PMID:19060904
Molecular Function	GO:0071209	U7 snRNA binding	LSM10	IPI	RNAcentral:URS000039C168_9606	Human	PMID:18082603
Cellular Component	GO:0015030	Cajal body	LSM10	IDA		Human	PMID:11574479
Cellular Component	GO:0016604	nuclear body	LSM10	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	LSM10	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005683	U7 snRNP	LSM10	IDA		Human	PMID:11574479
Biological Process	GO:1900087	positive regulation of G1/S transition of mitotic cell cycle	LSM10	IMP		Human	PMID:16914750

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern