Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes LRRC4B
  • Mouse genes Lrrc4b
  • Rat genes Lrrc4b
  • Zfish genes lrrc4ba,lrrc4bb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Lrrc4b

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	Lrrc4b	IPI	PR:Q91XM9	Mouse	PMID:16980967
Molecular Function	GO:0005515	protein binding	Lrrc4b	IPI	PR:P70175	Mouse	PMID:16980967
Molecular Function	GO:0005515	protein binding	Lrrc4b	IPI	PR:Q62108	Mouse	PMID:16980967
Molecular Function	GO:0005515	protein binding	Lrrc4b	IPI	PR:Q811D0	Mouse	PMID:16980967
Molecular Function	GO:0005102	signaling receptor binding	Lrrc4b	IPI	UniProtKB:Q64487	Mouse	MGI:MGI:5294265|PMID:21940441
Cellular Component	GO:0044300	cerebellar mossy fiber	Lrrc4b	IDA		Mouse	PMID:23791195
Cellular Component	GO:0098978	glutamatergic synapse	Lrrc4b	IDA		Rat	PMID:19252495|RGD:13702321
Cellular Component	GO:0098978	glutamatergic synapse	Lrrc4b	IMP		Rat	PMID:19252495|RGD:13702321
Cellular Component	GO:0098839	postsynaptic density membrane	Lrrc4b	IDA		Rat	PMID:19252495|RGD:13702321
Biological Process	GO:0051965	positive regulation of synapse assembly	Lrrc4b	IDA		Mouse	MGI:MGI:5294265|PMID:21940441
Biological Process	GO:0099151	regulation of postsynaptic density assembly	Lrrc4b	IDA		Rat	PMID:19252495|RGD:13702321
Biological Process	GO:0099151	regulation of postsynaptic density assembly	Lrrc4b	IMP		Rat	PMID:19252495|RGD:13702321
Biological Process	GO:1905606	regulation of presynapse assembly	Lrrc4b	IDA		Rat	PMID:19252495|RGD:13702321
Biological Process	GO:1905606	regulation of presynapse assembly	Lrrc4b	IMP		Rat	PMID:19252495|RGD:13702321
Biological Process	GO:0099560	synaptic membrane adhesion	Lrrc4b	IDA		Rat	PMID:19252495|RGD:13702321
Biological Process	GO:0099560	synaptic membrane adhesion	Lrrc4b	IMP		Rat	PMID:19252495|RGD:13702321

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern