Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes LRFN3
  • Mouse genes Lrfn3
  • Rat genes Lrfn3
  • Zfish genes si:cabz01090165.1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Lrfn3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Cellular Component	GO:0009986	cell surface	Lrfn3	IDA		Mouse	PMID:16828986
Cellular Component	GO:0098978	glutamatergic synapse	Lrfn3	IDA		Rat	PMID:27480238|RGD:13702184
Cellular Component	GO:0098978	glutamatergic synapse	Lrfn3	IMP		Rat	PMID:27480238|RGD:13702184
Cellular Component	GO:0098839	postsynaptic density membrane	Lrfn3	IDA		Rat	PMID:27480238|RGD:13702184
Cellular Component	GO:0099634	postsynaptic specialization membrane	Lrfn3	IDA		Rat	PMID:18227064|RGD:13702403
Cellular Component	GO:0048787	presynaptic active zone membrane	Lrfn3	IDA		Rat	PMID:18227064|RGD:13702403
Biological Process	GO:1905606	regulation of presynapse assembly	Lrfn3	IDA		Rat	PMID:27480238|RGD:13702184
Biological Process	GO:1905606	regulation of presynapse assembly	Lrfn3	IMP		Rat	PMID:27480238|RGD:13702184
Biological Process	GO:0099179	regulation of synaptic membrane adhesion	Lrfn3	IDA		Rat	PMID:27480238|RGD:13702184
Biological Process	GO:0099179	regulation of synaptic membrane adhesion	Lrfn3	IMP		Rat	PMID:27480238|RGD:13702184
Biological Process	GO:0099560	synaptic membrane adhesion	Lrfn3	IDA		Rat	PMID:18227064|RGD:13702403
Biological Process	GO:0099560	synaptic membrane adhesion	Lrfn3	IMP		Rat	PMID:18227064|RGD:13702403

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern