Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes LRFN2
  • Mouse genes Lrfn2
  • Rat genes Lrfn2
  • Zfish genes lrfn2a,lrfn2b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Lrfn2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	Lrfn2	IPI	UniProtKB:P35439-1|UniProtKB:P35439-4|UniProtKB:P35439|UniProtKB:Q62108|UniProtKB:Q811D0	Mouse	MGI:MGI:3616428|PMID:16495444
Molecular Function	GO:0005515	protein binding	Lrfn2	IPI	UniProtKB:Q62108	Mouse	MGI:MGI:5903931|PMID:28604739
Molecular Function	GO:0005515	protein binding	Lrfn2	IPI	PR:Q62108	Mouse	PMID:16828986
Molecular Function	GO:0005515	protein binding	Lrfn2	IPI	UniProtKB:P31016	Rat	PMID:16495444|RGD:8554054
Molecular Function	GO:0005515	protein binding	Lrfn2	IPI	UniProtKB:P35439	Rat	PMID:16495444|RGD:8554054
Molecular Function	GO:0005515	protein binding	Lrfn2	IPI	UniProtKB:Q00960	Rat	PMID:16495444|RGD:8554054
Molecular Function	GO:0005515	protein binding	Lrfn2	IPI	UniProtKB:Q62696	Rat	PMID:16495444|RGD:8554054
Molecular Function	GO:0005515	protein binding	Lrfn2	IPI	UniProtKB:Q62936	Rat	PMID:16495444|RGD:8554054
Molecular Function	GO:0005515	protein binding	Lrfn2	IPI	UniProtKB:Q8CGM3	Rat	PMID:16495444|RGD:8554054
Cellular Component	GO:0009986	cell surface	Lrfn2	IDA		Mouse	PMID:16828986
Cellular Component	GO:0098794	postsynapse	Lrfn2	IDA		Mouse	PMID:31368584
Cellular Component	GO:0098839	postsynaptic density membrane	Lrfn2	IDA		Rat	PMID:16495444|RGD:8554054
Cellular Component	GO:0098839	postsynaptic density membrane	Lrfn2	IMP		Rat	PMID:16495444|RGD:8554054
Cellular Component	GO:0098793	presynapse	Lrfn2	IDA		Mouse	PMID:31368584
Cellular Component	GO:0098685	Schaffer collateral - CA1 synapse	Lrfn2	IMP		Mouse	PMID:28604739
Cellular Component	GO:0098685	Schaffer collateral - CA1 synapse	Lrfn2	IDA		Mouse	PMID:28604739
Biological Process	GO:0050804	modulation of chemical synaptic transmission	Lrfn2	IMP		Mouse	PMID:28604739
Biological Process	GO:0050804	modulation of chemical synaptic transmission	Lrfn2	IDA		Mouse	PMID:28604739
Biological Process	GO:0099175	regulation of postsynapse organization	Lrfn2	IDA		Mouse	PMID:28604739
Biological Process	GO:0099175	regulation of postsynapse organization	Lrfn2	IMP		Mouse	PMID:28604739

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern