Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes LRCH4
  • Mouse genes Lrch4
  • Rat genes Lrch4
  • Zfish genes lrch4
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Lrch4

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	LRCH4	IPI	UniProtKB:Q99750	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	LRCH4	IPI	UniProtKB:Q99750	Human	PMID:19060904
Molecular Function	GO:0005515	protein binding	LRCH4	IPI	UniProtKB:Q96N67	Human	PMID:24255178
Molecular Function	GO:0005515	protein binding	LRCH4	IPI	UniProtKB:Q9Y2Z0	Human	PMID:24255178
Molecular Function	GO:0005515	protein binding	LRCH4	IPI	UniProtKB:P60409	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	LRCH4	IPI	UniProtKB:P60410	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	LRCH4	IPI	UniProtKB:Q6A162	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	LRCH4	IPI	UniProtKB:Q7Z3S9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	LRCH4	IPI	UniProtKB:Q8NF50-3	Human	PMID:32203420
Molecular Function	GO:0005515	protein binding	LRCH4	IPI	UniProtKB:Q96HP0	Human	PMID:32203420
Molecular Function	GO:0005515	protein binding	LRCH4	IPI	UniProtKB:Q96N67	Human	PMID:32203420
Molecular Function	GO:0005515	protein binding	LRCH4	IPI	UniProtKB:A1L3X0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LRCH4	IPI	UniProtKB:P00387	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LRCH4	IPI	UniProtKB:Q6P5S7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LRCH4	IPI	UniProtKB:Q86VR2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LRCH4	IPI	UniProtKB:Q8N6L0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LRCH4	IPI	UniProtKB:Q8NBQ5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Lrch4	IPI	PR:Q60520	Mouse	PMID:16449650
Cellular Component	GO:0005737	cytoplasm	Lrch4	IDA		Mouse	PMID:16449650
Cellular Component	GO:0016605	PML body	LRCH4	IDA		Human	PMID:16449650
Cellular Component	GO:0016605	PML body	Lrch4	IDA		Mouse	PMID:16449650
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	Lrch4	IMP		Mouse	PMID:16449650

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern