Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes LMO7
  • Mouse genes Lmo7
  • Rat genes Lmo7
  • Zfish genes lmo7a,lmo7b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Lmo7

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042805	actinin binding	Lmo7	IPI	RGD:1351855	Rat	PMID:15140894|RGD:1303994
Molecular Function	GO:0005515	protein binding	Lmo7	IPI	RGD:708561	Rat	PMID:15140894|RGD:1303994
Cellular Component	GO:0005912	adherens junction	Lmo7	IDA		Rat	PMID:15140894|RGD:1303994
Cellular Component	GO:0016324	apical plasma membrane	Lmo7	IDA		Mouse	MGI:MGI:3851071|PMID:19215226
Cellular Component	GO:0016324	apical plasma membrane	Lmo7	IDA		Rat	PMID:15140894|RGD:1303994
Cellular Component	GO:0009986	cell surface	LMO7	IDA		Human	PMID:17067998
Cellular Component	GO:0005737	cytoplasm	LMO7	IDA		Human	PMID:17067998
Cellular Component	GO:0005737	cytoplasm	Lmo7	IDA		Mouse	MGI:MGI:5317223|PMID:21525034
Cellular Component	GO:0005925	focal adhesion	LMO7	HDA		Human	PMID:21423176
Cellular Component	GO:0005635	nuclear envelope	LMO7	IDA		Human	PMID:17067998
Cellular Component	GO:0005635	nuclear envelope	Lmo7	IDA		Mouse	MGI:MGI:5317223|PMID:21525034
Cellular Component	GO:0005654	nucleoplasm	Lmo7	IDA		Mouse	MGI:MGI:5317223|PMID:21525034
Cellular Component	GO:0005634	nucleus	LMO7	IDA		Human	PMID:17067998
Cellular Component	GO:0005886	plasma membrane	Lmo7	IDA		Mouse	MGI:MGI:5317223|PMID:21525034
Biological Process	GO:0007507	heart development	lmo7b	IMP	ZFIN:ZDB-MRPHLNO-090210-1	Zfish	PMID:19035355
Biological Process	GO:0007507	heart development	lmo7b	IMP	ZFIN:ZDB-MRPHLNO-090210-2	Zfish	PMID:19035355
Biological Process	GO:0001947	heart looping	lmo7b	IMP	ZFIN:ZDB-MRPHLNO-090210-1	Zfish	PMID:19035355
Biological Process	GO:0001947	heart looping	lmo7b	IMP	ZFIN:ZDB-MRPHLNO-090210-2	Zfish	PMID:19035355
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	LMO7	IDA		Human	PMID:17067998
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Lmo7	IDA		Rat	PMID:17067998|RGD:13524620

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern