Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes LHX9
  • Mouse genes Lhx9
  • Rat genes Lhx9
  • Zfish genes lhx9
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Lhx9

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	LHX9	IPI	UniProtKB:P50053	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	LHX9	IPI	UniProtKB:Q2TBE0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	LHX9	IPI	UniProtKB:P50053-2	Human	PMID:25910212
Molecular Function	GO:0005515	protein binding	LHX9	IPI	UniProtKB:P0CB47	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LHX9	IPI	UniProtKB:P68400	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LHX9	IPI	UniProtKB:Q86U70-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LHX9	IPI	UniProtKB:Q86VF2-5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Lhx9	IPI	UniProtKB:Q9CYZ8	Mouse	MGI:MGI:4455093|PMID:20211142
Molecular Function	GO:0005515	protein binding	Lhx9	IPI	PR:Q9CYZ8	Mouse	PMID:11591653
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	LHX9	IDA		Human	PMID:28473536
Biological Process	GO:0008283	cell population proliferation	Lhx9	IMP	MGI:MGI:1888554	Mouse	PMID:10706291
Biological Process	GO:0008585	female gonad development	Lhx9	IMP	MGI:MGI:1888554	Mouse	PMID:10706291
Biological Process	GO:0035262	gonad morphogenesis	Lhx9	IMP	MGI:MGI:1888554	Mouse	PMID:10706291
Biological Process	GO:0008584	male gonad development	Lhx9	IMP	MGI:MGI:1888554	Mouse	PMID:10706291
Biological Process	GO:0048665	neuron fate specification	lhx9	IMP	ZFIN:ZDB-MRPHLNO-150605-1	Zfish	PMID:25725064
Biological Process	GO:0021794	thalamus development	lhx9	IGI	ZFIN:ZDB-MRPHLNO-120201-1,ZFIN:ZDB-MRPHLNO-120202-5	Zfish	PMID:22180728

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern