Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes JMY
  • Mouse genes Jmy
  • Rat genes Jmy
  • Zfish genes jmy
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Jmy

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0008017	microtubule binding	JMY	IDA		Human	PMID:30420355
Molecular Function	GO:0005515	protein binding	JMY	IPI	UniProtKB:P04637	Human	PMID:10518217
Molecular Function	GO:0005515	protein binding	JMY	IPI	UniProtKB:Q00987	Human	PMID:17170761
Molecular Function	GO:0005515	protein binding	JMY	IPI	UniProtKB:Q99LG4	Human	PMID:30420355
Molecular Function	GO:0005515	protein binding	JMY	IPI	UniProtKB:Q9GZQ8	Human	PMID:30420355
Molecular Function	GO:0005515	protein binding	Jmy	IPI	UniProtKB:Q09472|UniProtKB:Q99LG4	Mouse	MGI:MGI:6828905|PMID:11511361
Molecular Function	GO:0005515	protein binding	Jmy	IPI	UniProtKB:Q09472	Mouse	MGI:MGI:1891484|PMID:10518217
Molecular Function	GO:0003713	transcription coactivator activity	Jmy	IDA		Mouse	PMID:10518217
Cellular Component	GO:0000421	autophagosome membrane	JMY	IDA		Human	PMID:30420355
Cellular Component	GO:0031252	cell leading edge	JMY	IDA		Human	PMID:19287377
Cellular Component	GO:0031410	cytoplasmic vesicle	JMY	IDA		Human	PMID:30420355
Cellular Component	GO:0005634	nucleus	Jmy	IDA		Mouse	MGI:MGI:4418600|PMID:19287377
Biological Process	GO:0070060	'de novo' actin filament nucleation	Jmy	IDA		Mouse	MGI:MGI:4418600|PMID:19287377
Biological Process	GO:0070358	actin polymerization-dependent cell motility	Jmy	IDA		Mouse	MGI:MGI:4418600|PMID:19287377
Biological Process	GO:0034314	Arp2/3 complex-mediated actin nucleation	Jmy	IDA		Mouse	MGI:MGI:4418600|PMID:19287377
Biological Process	GO:0009267	cellular response to starvation	JMY	IMP		Human	PMID:30420355
Biological Process	GO:0072332	intrinsic apoptotic signaling pathway by p53 class mediator	Jmy	IDA		Mouse	PMID:10518217
Biological Process	GO:0043065	positive regulation of apoptotic process	Jmy	IDA		Mouse	MGI:MGI:1891484|PMID:10518217
Biological Process	GO:0051091	positive regulation of DNA-binding transcription factor activity	Jmy	IDA		Mouse	MGI:MGI:1891484|PMID:10518217
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	Jmy	IDA		Mouse	PMID:10518217

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern