Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes JMJD1C
  • Mouse genes Jmjd1c
  • Rat genes Jmjd1c
  • Zfish genes jmjd1ca,jmjd1cb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Jmjd1c

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	JMJD1C	IPI	UniProtKB:P10275	Human	PMID:17353003
Molecular Function	GO:0005515	protein binding	JMJD1C	IPI	UniProtKB:P10275	Human	PMID:33640491
Biological Process	GO:0003382	epithelial cell morphogenesis	Jmjd1c	IMP	MGI:MGI:5544070	Mouse	PMID:24006281
Biological Process	GO:0002244	hematopoietic progenitor cell differentiation	jmjd1ca	IMP		Zfish	PMID:24240475
Biological Process	GO:0030097	hemopoiesis	jmjd1cb	IMP	ZFIN:ZDB-MRPHLNO-160526-15	Zfish	PMID:22139419
Biological Process	GO:0098727	maintenance of cell number	Jmjd1c	IMP	MGI:MGI:5544070	Mouse	PMID:24006281
Biological Process	GO:0036098	male germ-line stem cell population maintenance	Jmjd1c	IMP	MGI:MGI:5544070	Mouse	PMID:24006281
Biological Process	GO:0008584	male gonad development	Jmjd1c	IMP	MGI:MGI:5544070	Mouse	PMID:24006281
Biological Process	GO:0061515	myeloid cell development	jmjd1cb	IMP	ZFIN:ZDB-MRPHLNO-160526-15	Zfish	PMID:22139419
Biological Process	GO:1990636	reproductive senescence	Jmjd1c	IMP	MGI:MGI:5544070	Mouse	PMID:24006281
Biological Process	GO:0072520	seminiferous tubule development	Jmjd1c	IMP	MGI:MGI:5544070	Mouse	PMID:24006281

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern