Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes JAML
  • Mouse genes Jaml
  • Rat genes Jaml
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Jaml

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0050839	cell adhesion molecule binding	JAML	IPI	UniProtKB:P78310	Human	PMID:12869515
Molecular Function	GO:0050839	cell adhesion molecule binding	JAML	IPI	UniProtKB:P78310	Human	PMID:15800062
Molecular Function	GO:0005178	integrin binding	JAML	IPI	UniProtKB:P05556	Human	PMID:12869515
Molecular Function	GO:0042803	protein homodimerization activity	JAML	IDA		Human	PMID:12869515
Cellular Component	GO:0005923	bicellular tight junction	JAML	IDA		Human	PMID:15800062
Cellular Component	GO:0005654	nucleoplasm	JAML	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005886	plasma membrane	JAML	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005886	plasma membrane	JAML	IDA		Human	PMID:12869515
Cellular Component	GO:0005886	plasma membrane	Jaml	IDA		Mouse	MGI:MGI:4822257|PMID:20813954
Biological Process	GO:0046629	gamma-delta T cell activation	Jaml	IDA		Mouse	MGI:MGI:4822257|PMID:20813954
Biological Process	GO:0007157	heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules	JAML	IDA		Human	PMID:12869515
Biological Process	GO:0007157	heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules	JAML	IDA		Human	PMID:15800062
Biological Process	GO:0007157	heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules	JAML	IMP		Human	PMID:18948633
Biological Process	GO:0035696	monocyte extravasation	JAML	IMP		Human	PMID:18948633
Biological Process	GO:0030593	neutrophil chemotaxis	JAML	IMP		Human	PMID:15800062
Biological Process	GO:0072672	neutrophil extravasation	JAML	IMP		Human	PMID:15800062
Biological Process	GO:0060054	positive regulation of epithelial cell proliferation involved in wound healing	Jaml	IDA		Mouse	MGI:MGI:4822257|PMID:20813954

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern