Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ITGA9
  • Mouse genes Itga9
  • Rat genes Itga9
  • Zfish genes itga9
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Itga9

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005518	collagen binding	Itga9	IDA		Rat	PMID:8020590|RGD:2317878
Molecular Function	GO:0043236	laminin binding	Itga9	IDA		Rat	PMID:8020590|RGD:2317878
Molecular Function	GO:0005515	protein binding	Itga9	IPI	RGD:2927	Rat	PMID:8020590|RGD:2317878
Cellular Component	GO:0009925	basal plasma membrane	Itga9	IDA		Mouse	PMID:7534781
Cellular Component	GO:0034679	integrin alpha9-beta1 complex	Itga9	IDA		Rat	PMID:8020590|RGD:2317878
Cellular Component	GO:0016020	membrane	Itga9	IDA		Rat	PMID:9202984|RGD:1581320
Biological Process	GO:0007155	cell adhesion	ITGA9	IGI	UniProtKB:Q60718	Human	PMID:21060781
Biological Process	GO:0001946	lymphangiogenesis	itga9	IMP	ZFIN:ZDB-MRPHLNO-160113-5	Zfish	PMID:25745057
Biological Process	GO:0001946	lymphangiogenesis	itga9	IGI	ZFIN:ZDB-MRPHLNO-160113-1,ZFIN:ZDB-MRPHLNO-160113-5,ZFIN:ZDB-MRPHLNO-160218-1	Zfish	PMID:25745057
Biological Process	GO:0001946	lymphangiogenesis	itga9	IMP	ZFIN:ZDB-MRPHLNO-160113-6	Zfish	PMID:25745057
Biological Process	GO:0030593	neutrophil chemotaxis	Itga9	IGI	MGI:MGI:98389	Mouse	PMID:21321126
Biological Process	GO:0042060	wound healing	Itga9	IEP		Rat	PMID:10219625|RGD:2317877

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern