Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ITGA11
  • Mouse genes Itga11
  • Rat genes Itga11
  • Zfish genes itga11a,itga11b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Itga11

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005518	collagen binding	ITGA11	IMP		Human	PMID:11518510
Molecular Function	GO:0098639	collagen binding involved in cell-matrix adhesion	ITGA11	IMP		Human	PMID:24823363
Molecular Function	GO:0038064	collagen receptor activity	ITGA11	IMP		Human	PMID:11518510
Cellular Component	GO:0005925	focal adhesion	ITGA11	IDA		Human	PMID:11518510
Cellular Component	GO:0005925	focal adhesion	ITGA11	HDA		Human	PMID:21423176
Cellular Component	GO:0034681	integrin alpha11-beta1 complex	ITGA11	IDA		Human	PMID:24823363
Cellular Component	GO:0016020	membrane	ITGA11	HDA		Human	PMID:16210410
Biological Process	GO:0033627	cell adhesion mediated by integrin	ITGA11	IMP		Human	PMID:11518510
Biological Process	GO:0007160	cell-matrix adhesion	ITGA11	IMP		Human	PMID:11518510
Biological Process	GO:0007160	cell-matrix adhesion	ITGA11	IMP		Human	PMID:24823363
Biological Process	GO:0038065	collagen-activated signaling pathway	ITGA11	IMP		Human	PMID:11518510
Biological Process	GO:0010761	fibroblast migration	Itga11	IMP		Mouse	PMID:15183724
Biological Process	GO:0007229	integrin-mediated signaling pathway	ITGA11	IMP		Human	PMID:24823363
Biological Process	GO:0001649	osteoblast differentiation	ITGA11	HDA		Human	PMID:16210410
Biological Process	GO:0006929	substrate-dependent cell migration	ITGA11	IMP		Human	PMID:11518510
Biological Process	GO:0006929	substrate-dependent cell migration	Itga11	IMP		Mouse	PMID:15183724

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern