Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes IQCJ-SCHIP1
  • Mouse genes Iqschfp
  • Rat genes Schip1
  • Zfish genes schip1,zgc:153615
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Iqschfp

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0030506	ankyrin binding	Iqschfp	IDA		Mouse	MGI:MGI:6107458|PMID:18550753
Molecular Function	GO:0005516	calmodulin binding	Iqschfp	IDA		Mouse	MGI:MGI:6107458|PMID:18550753
Molecular Function	GO:0005515	protein binding	IQCJ-SCHIP1	IPI	UniProtKB:O70511	Human	PMID:25950943
Molecular Function	GO:0005515	protein binding	IQCJ-SCHIP1	IPI	UniProtKB:P62157	Human	PMID:25950943
Molecular Function	GO:0005515	protein binding	IQCJ-SCHIP1	IPI	UniProtKB:Q01484	Human	PMID:25950943
Molecular Function	GO:0005515	protein binding	Iqschfp	IPI	UniProtKB:E9PX29	Mouse	MGI:MGI:5888972|PMID:27979964
Molecular Function	GO:0044325	transmembrane transporter binding	Iqschfp	IPI	UniProtKB:Q9Z351	Mouse	MGI:MGI:5888972|PMID:27979964
Cellular Component	GO:0043194	axon initial segment	Iqschfp	IMP		Mouse	MGI:MGI:6212949|PMID:25950943
Cellular Component	GO:0043194	axon initial segment	Iqschfp	IDA		Mouse	MGI:MGI:6107458|PMID:18550753
Cellular Component	GO:0033268	node of Ranvier	Iqschfp	IDA		Mouse	MGI:MGI:6107458|PMID:18550753
Biological Process	GO:0008366	axon ensheathment	Iqschfp	IMP		Mouse	MGI:MGI:5888972|PMID:27979964
Biological Process	GO:0051494	negative regulation of cytoskeleton organization	IQCJ-SCHIP1	IMP		Human	PMID:25950943

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern