Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes IPMK
  • Mouse genes Ipmk
  • Rat genes Ipmk
  • Zfish genes ipmka,ipmkb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ipmk

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0097243	flavonoid binding	IPMK	IDA		Human	PMID:30624931
Molecular Function	GO:0000824	inositol tetrakisphosphate 3-kinase activity	Ipmk	IMP	MGI:MGI:3583918	Mouse	PMID:15939867
Molecular Function	GO:0000825	inositol tetrakisphosphate 6-kinase activity	IPMK	IMP		Human	PMID:29883610
Molecular Function	GO:0008440	inositol-1,4,5-trisphosphate 3-kinase activity	IPMK	IDA		Human	PMID:30624931
Molecular Function	GO:0008440	inositol-1,4,5-trisphosphate 3-kinase activity	Ipmk	IMP	MGI:MGI:3583918	Mouse	PMID:15939867
Molecular Function	GO:0046934	phosphatidylinositol-4,5-bisphosphate 3-kinase activity	Ipmk	IDA		Rat	PMID:16123124|RGD:14402437
Molecular Function	GO:0005515	protein binding	IPMK	IPI	UniProtKB:O75031	Human	PMID:32296183
Cellular Component	GO:0005654	nucleoplasm	IPMK	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	Ipmk	IDA		Rat	PMID:16123124|RGD:14402437
Biological Process	GO:0032958	inositol phosphate biosynthetic process	Ipmk	IMP	MGI:MGI:3583918	Mouse	PMID:15939867
Biological Process	GO:0032957	inositol trisphosphate metabolic process	IPMK	IDA		Human	PMID:30624931
Biological Process	GO:0070266	necroptotic process	IPMK	IMP		Human	PMID:29883610
Biological Process	GO:0001841	neural tube formation	Ipmk	IMP	MGI:MGI:3583918	Mouse	PMID:15939867

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern