Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes INO80E
  • Mouse genes Ino80e
  • Rat genes Ino80e
  • Zfish genes ino80e
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ino80e

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	INO80E	IPI	UniProtKB:Q96EZ8	Human	PMID:16230350
Molecular Function	GO:0005515	protein binding	INO80E	IPI	UniProtKB:Q96EZ8	Human	PMID:18922472
Molecular Function	GO:0005515	protein binding	INO80E	IPI	UniProtKB:Q9Y5K5	Human	PMID:18922472
Molecular Function	GO:0005515	protein binding	INO80E	IPI	UniProtKB:Q9Y5K5	Human	PMID:19615732
Molecular Function	GO:0005515	protein binding	INO80E	IPI	UniProtKB:Q96EZ8	Human	PMID:21303910
Molecular Function	GO:0005515	protein binding	INO80E	IPI	UniProtKB:Q9Y5K5	Human	PMID:21303910
Molecular Function	GO:0005515	protein binding	INO80E	IPI	UniProtKB:O00560	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	INO80E	IPI	UniProtKB:O95379	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	INO80E	IPI	UniProtKB:P25786	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	INO80E	IPI	UniProtKB:P52292	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	INO80E	IPI	UniProtKB:P55040	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	INO80E	IPI	UniProtKB:Q05BL0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	INO80E	IPI	UniProtKB:Q13131	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	INO80E	IPI	UniProtKB:Q86V42	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	INO80E	IPI	UniProtKB:Q8NDC4	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	INO80E	IPI	UniProtKB:O00560	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	INO80E	IPI	UniProtKB:P55040	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	INO80E	IPI	UniProtKB:Q08117-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	INO80E	IPI	UniProtKB:Q13526	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	INO80E	IPI	UniProtKB:Q3B820	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	INO80E	IPI	UniProtKB:Q5T6S3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	INO80E	IPI	UniProtKB:Q8N8X9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	INO80E	IPI	UniProtKB:Q8TBB1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	INO80E	IPI	UniProtKB:Q96EZ8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	INO80E	IPI	UniProtKB:Q9NRD5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	INO80E	IPI	UniProtKB:Q9UJX2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	INO80E	IPI	UniProtKB:P42858	Human	PMID:32814053
Cellular Component	GO:0031011	Ino80 complex	INO80E	IDA		Human	PMID:21303910
Cellular Component	GO:0005730	nucleolus	INO80E	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	INO80E	IDA		Human	GO_REF:0000052
Biological Process	GO:0007420	brain development	ino80e	IMP	ZFIN:ZDB-MRPHLNO-121207-10	Zfish	PMID:22566537
Biological Process	GO:0006338	chromatin remodeling	INO80E	IDA		Human	PMID:21303910
Biological Process	GO:0045739	positive regulation of DNA repair	Ino80e	IDA		Mouse	MGI:MGI:5638510|PMID:23979016
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	INO80E	IMP		Human	PMID:27641337
Biological Process	GO:1904507	positive regulation of telomere maintenance in response to DNA damage	Ino80e	IMP		Mouse	MGI:MGI:5638510|PMID:23979016
Biological Process	GO:0051726	regulation of cell cycle	INO80E	IMP		Human	PMID:26340092
Biological Process	GO:0033044	regulation of chromosome organization	INO80E	IMP		Human	PMID:26340092
Biological Process	GO:0006282	regulation of DNA repair	Ino80e	IDA		Mouse	MGI:MGI:5638510|PMID:23979016
Biological Process	GO:0006275	regulation of DNA replication	INO80E	IMP		Human	PMID:25016522
Biological Process	GO:0060382	regulation of DNA strand elongation	INO80E	IMP		Human	PMID:25016522
Biological Process	GO:0045995	regulation of embryonic development	Ino80e	IMP		Mouse	MGI:MGI:5638510|PMID:23979016
Biological Process	GO:0000723	telomere maintenance	Ino80e	IMP		Mouse	MGI:MGI:5638510|PMID:23979016

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern