Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes IK
  • Mouse genes Ik
  • Rat genes Ik
  • Zfish genes ik
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ik

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042802	identical protein binding	IK	IPI	UniProtKB:Q13123	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	IK	IPI	UniProtKB:P04618	Human	PMID:22190034
Molecular Function	GO:0005515	protein binding	IK	IPI	UniProtKB:Q9Y6D9	Human	PMID:22351768
Molecular Function	GO:0005515	protein binding	IK	IPI	UniProtKB:O15541	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	IK	IPI	UniProtKB:O94906	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	IK	IPI	UniProtKB:P55081	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	IK	IPI	UniProtKB:P98175	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	IK	IPI	UniProtKB:Q15029	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	IK	IPI	UniProtKB:Q2TAY7	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	IK	IPI	UniProtKB:Q70Z53	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	IK	IPI	UniProtKB:Q8TAD8	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	IK	IPI	UniProtKB:Q96NB3	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	IK	IPI	UniProtKB:Q9HCS7	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	IK	IPI	UniProtKB:O14965	Human	PMID:24996188
Molecular Function	GO:0005515	protein binding	IK	IPI	UniProtKB:Q8NHQ1	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	IK	IPI	UniProtKB:Q2TAY7	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	IK	IPI	UniProtKB:O95983-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	IK	IPI	UniProtKB:P26196	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	IK	IPI	UniProtKB:P47897	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	IK	IPI	UniProtKB:Q2TAY7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	IK	IPI	UniProtKB:Q9H6Z9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	IK	IPI	UniProtKB:O75190	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	IK	IPI	UniProtKB:P02545	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	IK	IPI	UniProtKB:Q00403	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	IK	IPI	UniProtKB:Q01658	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	IK	IPI	UniProtKB:Q7Z699	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	IK	IPI	UniProtKB:Q96CV9	Human	PMID:32814053
Cellular Component	GO:0097431	mitotic spindle pole	IK	IDA		Human	PMID:22351768
Cellular Component	GO:0000228	nuclear chromosome	IK	IMP		Human	PMID:24252166
Cellular Component	GO:0016607	nuclear speck	IK	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	IK	IDA		Human	PMID:24252166
Cellular Component	GO:0005634	nucleus	IK	IDA		Human	PMID:28781166
Cellular Component	GO:0071005	U2-type precatalytic spliceosome	IK	IDA		Human	PMID:28781166
Biological Process	GO:0060047	heart contraction	ik	IMP	ZFIN:ZDB-MRPHLNO-090422-3	Zfish	PMID:19064678
Biological Process	GO:0000278	mitotic cell cycle	IK	IMP		Human	PMID:24252166
Biological Process	GO:0007094	mitotic spindle assembly checkpoint signaling	IK	IMP		Human	PMID:22351768
Biological Process	GO:0000398	mRNA splicing, via spliceosome	IK	IDA		Human	PMID:28781166
Biological Process	GO:0034501	protein localization to kinetochore	IK	IMP		Human	PMID:22351768

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern